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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

X: Ribosomal protein L13/L15p/L18e/L32e
H: Ribosomal protein L13 and L16-A
T: Ribosomal protein L13 and L16-A
F: Ribosomal_L13

PF00572

Representatives:

e1j3aA1[A:1-142] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

50S RIBOSOMAL PROTEIN L13P ; X-RAY DIFFRACTION 1.6Å

e3j3bO1[O:2-203] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3j65J1[J:3-199] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3j9zLF1[LF:1-142] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e4y4o2N1[2N:1-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; X-RAY DIFFRACTION 2.300Å

e4y4p1N1[1N:1-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å

e4y4p2N1[2N:1-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å

e4ybbDK1[DK:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG,MPD ; X-RAY DIFFRACTION 2.000Å

e3jcjI1[I:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e3jcnJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e5lzaJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e5lzbJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e5lzcJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e5lzdJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; ELECTRON MICROSCOPY

e5lzeJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e5lzfJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7n1pLM1[LM:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; ELECTRON MICROSCOPY

e7opeN1[N:4-145] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7k50j1[j:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7nspJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7a0rG1[G:30-172] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; X-RAY DIFFRACTION 3.300Å

e7abzJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7o19BJ1[BJ:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7a0sG1[G:30-171] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; X-RAY DIFFRACTION 3.210Å

e7ac7J1[J:2-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7acjJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7acrJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; ELECTRON MICROSCOPY

e7k51j1[j:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7k52j1[j:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7k53j1[j:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7k54j1[j:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7k55j1[j:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7lv0j1[j:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7n2cLM1[LM:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7n2uLM1[LM:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7n2vLM1[LM:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; ELECTRON MICROSCOPY

e7n30LM1[LM:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; ELECTRON MICROSCOPY

e7n31LM1[LM:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; ELECTRON MICROSCOPY

e7nsoJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7nsqJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7o1aBJ1[BJ:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7o1cBJ1[BJ:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7oizi1[i:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG,TRP ; ELECTRON MICROSCOPY

e7oj0i1[i:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG,TRP ; ELECTRON MICROSCOPY

e7a18G1[G:30-171] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; X-RAY DIFFRACTION 3.300Å

e7asmH1[H:1-145] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7asnH1[H:1-145] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7asoM1[M:1-145] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7aspH1[H:1-145] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7cpjJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7lvkR1[R:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH

50S ribosomal protein L13 ; ligands: MG ; ELECTRON MICROSCOPY

e7nwtJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7p3ki1[i:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; ELECTRON MICROSCOPY

e7pjsJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7pjtJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7pjuJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7pjvJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7pjwJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7pjxJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7pjyJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7pjzJ1[J:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7rq81N1[1N:1-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; X-RAY DIFFRACTION 2.500Å

e7rq82N1[2N:1-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; X-RAY DIFFRACTION 2.500Å

e7rq91N1[1N:1-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e7rq92N1[2N:1-140] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ligands: MG ; X-RAY DIFFRACTION 2.600Å

e7s1gR1[R:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e7s1hR1[R:1-142] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13 ; ELECTRON MICROSCOPY

e3u5eO1[O:3-199] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e4v19N1[N:2-178] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

MITORIBOSOMAL PROTEIN UL13M, MRPL13 ; ELECTRON MICROSCOPY

e4v7eCO1[CO:1-206] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L13 ; ELECTRON MICROSCOPY

e5mmiK1[K:48-250] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L13, chloroplastic ; ligands: MG ; ELECTRON MICROSCOPY

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes