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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

X: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
H: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
T: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
F: Peptidase_C30

PF05409 CL0124

Representatives:

e2ducA3[A:187-306] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Replicase polyprotein 1ab ; X-RAY DIFFRACTION 1.7Å

e2lizA1[A:187-306] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

3C-LIKE PROTEINASE ; SOLUTION NMR

e7rvtA1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7XK ; X-RAY DIFFRACTION 2.10Å

e7rvtB2[B:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7XK ; X-RAY DIFFRACTION 2.10Å

e7rvuA2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7XT ; X-RAY DIFFRACTION 2.50Å

e7rvvA1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7Y2 ; X-RAY DIFFRACTION 3.00Å

e7rvwA2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7YB ; X-RAY DIFFRACTION 1.85Å

e7rvxA1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7YI ; X-RAY DIFFRACTION 1.85Å

e7rvxB2[B:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7YI ; X-RAY DIFFRACTION 1.85Å

e7rvyA1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7YQ ; X-RAY DIFFRACTION 1.85Å

e7rvzA2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7YW ; X-RAY DIFFRACTION 1.90Å

e7rw0A2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7YZ ; X-RAY DIFFRACTION 1.85Å

e7rw1A2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 800 ; X-RAY DIFFRACTION 2.50Å

e7rw1B2[B:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 800 ; X-RAY DIFFRACTION 2.50Å

e7s6wA2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 8G9 ; X-RAY DIFFRACTION 2.29Å

e7s6wB1[B:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 8G9 ; X-RAY DIFFRACTION 2.29Å

e7s6xA1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: I70 ; X-RAY DIFFRACTION 1.80Å

e7s6yA2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 8GW ; X-RAY DIFFRACTION 1.85Å

e7s6zA2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: I71 ; X-RAY DIFFRACTION 1.85Å

e7s70A2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 8H3 ; X-RAY DIFFRACTION 2.60Å

e7s71A1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 8H9 ; X-RAY DIFFRACTION 1.85Å

e7s72A2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 8I0 ; X-RAY DIFFRACTION 2.50Å

e7s73A2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: I69 ; X-RAY DIFFRACTION 1.85Å

e7s74A1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: I68 ; X-RAY DIFFRACTION 1.70Å

e7s74B2[B:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: I68 ; X-RAY DIFFRACTION 1.70Å

e7s75A1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 8I7 ; X-RAY DIFFRACTION 1.80Å

e7tuuA1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: U88 ; X-RAY DIFFRACTION 1.85Å

e7vahA2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; X-RAY DIFFRACTION 1.490Å

e7b2jA2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,SQ2 ; X-RAY DIFFRACTION 1.55Å

e7b2uA2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,SQ5 ; X-RAY DIFFRACTION 1.55Å

e7b2uB2[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,SQ5 ; X-RAY DIFFRACTION 1.55Å

e7b5zA1[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,SYH ; X-RAY DIFFRACTION 1.65Å

e7b77A2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,T0W ; X-RAY DIFFRACTION 1.60Å

e7bijAAA2[AAA:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,TU8 ; X-RAY DIFFRACTION 1.47Å

e7e6kA2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH

3C-like proteinase ; ligands: HYR ; X-RAY DIFFRACTION 1.600Å

e7nbtAAA1[AAA:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,U7W ; X-RAY DIFFRACTION 1.63Å

e7neoAAA2[AAA:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,U9H ; X-RAY DIFFRACTION 1.64Å

e7neoBBB2[BBB:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,U9H ; X-RAY DIFFRACTION 1.64Å

e7ntqA2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: DMS,FMT,NA ; X-RAY DIFFRACTION 1.49Å

e7ntwA1[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH

3C-like proteinase ; ligands: DMS,FMT,NA ; X-RAY DIFFRACTION 1.815Å

e7p2gA1[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 4N0 ; X-RAY DIFFRACTION 2.5Å

e7qt5A2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,GWS ; X-RAY DIFFRACTION 2.26Å

e7qt8A2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; X-RAY DIFFRACTION 2.01Å

e7qt8B2[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; X-RAY DIFFRACTION 2.01Å

e7u29B2[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 2.09Å

e8d4jB1[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.78Å

e8d4kA2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: K36 ; X-RAY DIFFRACTION 1.89Å

e8d4lA1[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.70Å

e8d4lB2[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.70Å

e8d4mA1[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: K36 ; X-RAY DIFFRACTION 1.81Å

e8d4nB1[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 2.70Å

e8dczA2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 2.38Å

e8dczB1[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 2.38Å

e8ddmA2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: K36 ; X-RAY DIFFRACTION 2.78Å

e8dfnA1[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 2.04Å

e8dgbA1[A:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: B1S ; X-RAY DIFFRACTION 2.87Å

e8dgbB1[B:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: B1S ; X-RAY DIFFRACTION 2.87Å

e8dz9D1[D:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 1.66Å

e7pflA2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH

Replicase polyprotein 1ab ; X-RAY DIFFRACTION 1.800Å

e7pfmA1[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH

Replicase polyprotein 1ab ; ligands: 7IL ; X-RAY DIFFRACTION 2.000Å

e7pfmB2[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH

Replicase polyprotein 1ab ; ligands: 7IL ; X-RAY DIFFRACTION 2.000Å

e7phzB1[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH

Replicase polyprotein 1ab ; ligands: DMS,EDO,NA,X77 ; X-RAY DIFFRACTION 1.66Å

e7t2tA1[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; X-RAY DIFFRACTION 1.450Å

e7v1tA1[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH

3C-like proteinase ; ligands: 5IL ; X-RAY DIFFRACTION 2.560Å

e7wymA2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: G7L ; X-RAY DIFFRACTION 2.05Å

e7wypB2[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: G7O ; X-RAY DIFFRACTION 2.30Å

e7z59A1[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: EDO,IFO ; X-RAY DIFFRACTION 2.00Å

e7qbbA2[A:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,V1B ; X-RAY DIFFRACTION 2.000Å

e7qt6A2[A:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,RZJ ; X-RAY DIFFRACTION 2.11Å

e7qt7A1[A:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: DMS,UHV ; X-RAY DIFFRACTION 2.25Å

e7qt9A2[A:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Non-structural protein 6 ; ligands: DMS,UJ1 ; X-RAY DIFFRACTION 2.43Å

e7rnwC1[C:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; X-RAY DIFFRACTION 2.350Å

e7tgrA2[A:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: B1S,EDO,K,K36 ; X-RAY DIFFRACTION 1.680Å

e7vlpA1[A:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Replicase polyprotein 1a ; ligands: 4WI ; X-RAY DIFFRACTION 1.50Å

e7z0pAAA1[AAA:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: I8H,NA ; X-RAY DIFFRACTION 2.52Å

e8d4nA2[A:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 2.70Å

e8dd9A1[A:187-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: B1S ; X-RAY DIFFRACTION 2.04Å

e7vlqB2[B:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 1.93910601486Å

e8czwB1[B:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: P8L,P8U,PG4 ; X-RAY DIFFRACTION 1.700Å

e8e68B1[B:187-302] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: WGO,WGU ; X-RAY DIFFRACTION 1.600Å

e7o46A1[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: V18 ; X-RAY DIFFRACTION 2.230Å

e7ql8AAA1[AAA:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: I70 ; X-RAY DIFFRACTION 1.807Å

e7tiuA2[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: MG,V46 ; X-RAY DIFFRACTION 1.56Å

e7tivA2[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: MG,W48 ; X-RAY DIFFRACTION 1.88Å

e7tj0A1[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: ACT,S4L ; X-RAY DIFFRACTION 1.95Å

e7tq6A1[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: IT3,ITG ; X-RAY DIFFRACTION 1.550Å

e7vicA2[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; X-RAY DIFFRACTION 2.100Å

e7vlqA1[A:187-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 1.93910601486Å

e7vthA2[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7XB ; X-RAY DIFFRACTION 2.000Å

e7vthB2[B:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7XB ; X-RAY DIFFRACTION 2.000Å

e7vvtB1[B:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 80X ; X-RAY DIFFRACTION 2.500Å

e8dfeA1[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.89Å

e8e5xB2[B:187-301] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: UO9,URR ; X-RAY DIFFRACTION 1.700Å

e7en8B1[B:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: GOL,J7R ; X-RAY DIFFRACTION 1.83Å

e7tq3A2[A:187-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: IS5 ; X-RAY DIFFRACTION 2.000Å

e7tq3B2[B:187-298] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: IS5 ; X-RAY DIFFRACTION 2.000Å

e7tq4A1[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: IRZ ; X-RAY DIFFRACTION 2.450Å

e7vvpA2[A:187-298] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; X-RAY DIFFRACTION 1.97Å

e7vvpB1[B:187-298] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: 80I ; X-RAY DIFFRACTION 1.97Å

e7x6jA1[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: QNC ; X-RAY DIFFRACTION 1.500Å

e7nijA2[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.580Å

e7tq5A2[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: IRW,ITX ; X-RAY DIFFRACTION 1.650Å

e7vfaE2[E:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; X-RAY DIFFRACTION 1.75Å

e7vloB1[B:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 2.02Å

e7vvtA2[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 80X ; X-RAY DIFFRACTION 2.500Å

e8doyA2[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 1PE,T1X ; X-RAY DIFFRACTION 1.59Å

e8doyB1[B:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: T1X ; X-RAY DIFFRACTION 1.59Å

e8e61B1[B:187-301] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: VLU,VM0 ; X-RAY DIFFRACTION 1.850Å

e8e64A1[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: WEL ; X-RAY DIFFRACTION 1.750Å

e7v7mA1[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH

3C-like proteinase ; X-RAY DIFFRACTION 2.08Å

e7wypA1[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: G7O ; X-RAY DIFFRACTION 2.30Å

e7vloA1[A:187-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 2.02Å

e7zb7A2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase nsp5 ; ligands: DMS ; X-RAY DIFFRACTION 1.63Å

e7zb8A1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 2.477Å

e7zb8C2[C:187-306] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase nsp5 ; ligands: DMS ; X-RAY DIFFRACTION 2.477Å

e8ddiA2[A:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 2.80Å

e8e1yA2[A:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI,DMS ; X-RAY DIFFRACTION 2.48Å

e8e1yB2[B:187-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI,DMS ; X-RAY DIFFRACTION 2.48Å

e7endA1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Replicase polyprotein 1a ; ligands: J7R ; X-RAY DIFFRACTION 1.99Å

e7tq2B1[B:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: ISG ; X-RAY DIFFRACTION 2.300Å

e7vfbA1[A:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; X-RAY DIFFRACTION 2.0Å

e7rnwA2[A:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; X-RAY DIFFRACTION 2.350Å

e7rnwD1[D:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; X-RAY DIFFRACTION 2.350Å

e7tiaA1[A:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: SCN,XTP ; X-RAY DIFFRACTION 1.57Å

e7tiwA1[A:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: I54 ; X-RAY DIFFRACTION 1.60Å

e7tixA1[A:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: MG,Q56 ; X-RAY DIFFRACTION 1.91Å

e7tiyA1[A:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: PO4,Y48 ; X-RAY DIFFRACTION 1.64Å

e7tizA1[A:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: N63,NA,SCN ; X-RAY DIFFRACTION 1.49Å

e7u28A1[A:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 1.68Å

e7u28B2[B:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 1.68Å

e7wo3A1[A:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 59S ; X-RAY DIFFRACTION 2.00Å

e7wofA1[A:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 5IZ ; X-RAY DIFFRACTION 1.63Å

e7wohA1[A:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 5IW ; X-RAY DIFFRACTION 1.6Å

e7wohB2[B:187-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 5IW ; X-RAY DIFFRACTION 1.6Å

e8czxB1[B:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: P8C,PG4,PJR ; X-RAY DIFFRACTION 1.650Å

e8dprA1[A:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH

3C-like proteinase nsp5 ; ligands: DMS,T43 ; X-RAY DIFFRACTION 2.00Å

e8dz9A1[A:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 1.66Å

e8dz9B1[B:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI,DMS ; X-RAY DIFFRACTION 1.66Å

e8dz9C1[C:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 1.66Å

e8e61A2[A:187-302] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: VLU,VM0 ; X-RAY DIFFRACTION 1.850Å

e7x6kA1[A:187-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 9FF ; X-RAY DIFFRACTION 2.340Å

e7vu6A2[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7YY ; X-RAY DIFFRACTION 1.800Å

e8czwA2[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: P8L,P8U ; X-RAY DIFFRACTION 1.700Å

e8czxA2[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: P8C,PJR ; X-RAY DIFFRACTION 1.650Å

e8e68A1[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: WGO,WGU ; X-RAY DIFFRACTION 1.600Å

e7tq2A2[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: ISG ; X-RAY DIFFRACTION 2.300Å

e7wkuB1[B:186-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidase C30 ; X-RAY DIFFRACTION 2.600Å

e7wkuD1[D:186-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidase C30 ; X-RAY DIFFRACTION 2.600Å

e7wkuE2[E:186-303] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidase C30 ; X-RAY DIFFRACTION 2.600Å

e7wkuF2[F:186-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidase C30 ; X-RAY DIFFRACTION 2.600Å

e7wqhB1[B:187-300] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: 80I ; X-RAY DIFFRACTION 2.32Å

e7tvxA1[A:185-300] Image Pymol Jmol Links: PDB, SCOP, CATH

3C-like proteinase nsp5 ; ligands: G65 ; X-RAY DIFFRACTION 2.094Å

e8d4jA1[A:185-300] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: GOL ; X-RAY DIFFRACTION 1.78Å

e7wkuA1[A:186-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidase C30 ; X-RAY DIFFRACTION 2.600Å

e7wkuC2[C:186-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Peptidase C30 ; X-RAY DIFFRACTION 2.600Å

e7tq5B1[B:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: CL,IRW,ITX ; X-RAY DIFFRACTION 1.650Å

e7vlpB2[B:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Replicase polyprotein 1a ; ligands: 4WI ; X-RAY DIFFRACTION 1.50Å

e7vu6B2[B:187-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 7YY ; X-RAY DIFFRACTION 1.800Å

e8e5xA1[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: UO9,URR ; X-RAY DIFFRACTION 1.700Å

e8e64B1[B:187-301] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: WEL,WEQ ; X-RAY DIFFRACTION 1.750Å

e8e65A2[A:187-301] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: WF5 ; X-RAY DIFFRACTION 1.800Å

e7eneA1[A:190-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ORF1a protein ; ligands: J7R ; X-RAY DIFFRACTION 2.98Å

e7eneB1[B:190-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ORF1a protein ; ligands: J7R ; X-RAY DIFFRACTION 2.98Å

e7eneC1[C:190-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ORF1a protein ; ligands: J7R ; X-RAY DIFFRACTION 2.98Å

e7eneD1[D:190-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

ORF1a protein ; ligands: J7R ; X-RAY DIFFRACTION 2.98Å

e7vtcA2[A:190-301] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 2.53865625155Å

e7wqjA2[A:190-301] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: 80I ; X-RAY DIFFRACTION 2.75Å

e7wqjB2[B:190-301] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; X-RAY DIFFRACTION 2.75Å

e7smvA1[A:186-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: UED ; X-RAY DIFFRACTION 1.93Å

e7smvB1[B:186-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: UED ; X-RAY DIFFRACTION 1.93Å

e7snaA2[A:186-302] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: UED ; X-RAY DIFFRACTION 2.05Å

e7snaB2[B:186-299] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: UED ; X-RAY DIFFRACTION 2.05Å

e8cztA1[A:190-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: P8L ; X-RAY DIFFRACTION 2.100Å

e8czuA1[A:190-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: P9R ; X-RAY DIFFRACTION 2.700Å

e8czvA2[A:190-305] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: P8C,PJR ; X-RAY DIFFRACTION 1.950Å

e8dgyA2[A:190-304] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: S9U,SD6 ; X-RAY DIFFRACTION 1.650Å

e8e6bA1[A:190-304] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

Orf1a protein ; ligands: UO9,URR ; X-RAY DIFFRACTION 1.550Å

e8e6bB2[B:190-304] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

Orf1a protein ; ligands: UO9,URR ; X-RAY DIFFRACTION 1.550Å

e8e6cA1[A:190-304] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

Orf1a protein ; ligands: UTU ; X-RAY DIFFRACTION 2.700Å

e8e6dA1[A:190-304] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

Orf1a protein ; ligands: UTL ; X-RAY DIFFRACTION 2.700Å

e8e6eA1[A:190-304] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

Orf1a protein ; ligands: UUR,UV2 ; X-RAY DIFFRACTION 1.500Å

e7wqhA2[A:187-300] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

3C-like proteinase ; ligands: 80I ; X-RAY DIFFRACTION 2.32Å

e8drrC1[C:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 2.000Å

e8drzA1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; ligands: 1PE,PEG,TRS ; X-RAY DIFFRACTION 1.980Å

e7setA2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase ; ligands: CL,I70 ; X-RAY DIFFRACTION 1.700Å

e8drsC1[C:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.40Å

e8drtB1[B:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.26Å

e8drtA2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.26Å

e8drvA2[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp8-nsp9 (C8) cut site ; X-RAY DIFFRACTION 2.200Å

e8drvB2[B:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp8-nsp9 (C8) cut site ; X-RAY DIFFRACTION 2.200Å

e8drwA1[A:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE,NA,PEG,PO4 ; X-RAY DIFFRACTION 2.67Å

e8drwB2[B:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE,NA,PEG,PO4 ; X-RAY DIFFRACTION 2.67Å

e8drwC1[C:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE,NA,PEG ; X-RAY DIFFRACTION 2.67Å

e8drwD2[D:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE,NA,PEG ; X-RAY DIFFRACTION 2.67Å

e8drwE2[E:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE,NA,PEG,PO4 ; X-RAY DIFFRACTION 2.67Å

e8drwF1[F:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE,NA,PEG,PO4 ; X-RAY DIFFRACTION 2.67Å

e8drwG2[G:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE ; X-RAY DIFFRACTION 2.67Å

e8drwH2[H:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE,NA,PEG,PO4 ; X-RAY DIFFRACTION 2.67Å

e8drwI2[I:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE,NA ; X-RAY DIFFRACTION 2.67Å

e8drwJ2[J:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE,NA,PO4 ; X-RAY DIFFRACTION 2.67Å

e8drwK1[K:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE ; X-RAY DIFFRACTION 2.67Å

e8drwL2[L:187-306] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Fusion protein of 3C-like proteinase nsp5 and nsp9-nsp10 (C9) cut site ; ligands: 1PE,NA,PO4 ; X-RAY DIFFRACTION 2.67Å

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alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes