Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
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Representatives:
e5gyqA1[A:3-171]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
Spike glycoprotein ; ligands: NAG ; X-RAY DIFFRACTION 2.10Å
e2ghvC1[C:320-502]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
SPIKE GLYCOPROTEIN ; X-RAY DIFFRACTION 2.2Å
e7x7oC1[C:335-514] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.75Å
e7x7oD1[D:333-515] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.75Å
e7zfcE1[E:331-523] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.24Å
e7zfeB1[B:335-517] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.25Å
e7zfeA1[A:336-518] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.25Å
e7f0xA1[A:334-516] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; X-RAY DIFFRACTION 2.80Å
e7f12A1[A:334-515] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.15Å
e7f15A1[A:334-516] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.65Å
e7f7hE1[E:334-515] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike glycoprotein S1 ; X-RAY DIFFRACTION 3.19Å
e7fcpA1[A:334-518] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG,TRS ; X-RAY DIFFRACTION 2.40Å
e7fjcE1[E:333-519] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; X-RAY DIFFRACTION 2.96Å
e7p19E1[E:339-519] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: CL,NAG ; X-RAY DIFFRACTION 3.236Å
e7ru8C1[C:333-515] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e7wonF1[F:336-518] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7wp0F1[F:336-518] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7wp1F1[F:336-518] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7wp2F1[F:337-518] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7wp5F1[F:336-518] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spikeprotein S1 ; ELECTRON MICROSCOPY
e7wroR1[R:334-516] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7x7vE1[E:320-508] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7yadE1[E:332-516] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7f7eE1[E:332-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.49Å
e7pqyE1[E:334-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.0Å
e7pqzE1[E:334-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: PO4 ; X-RAY DIFFRACTION 3.2Å
e7pr0E1[E:329-525] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: CL,NAG,SO4 ; X-RAY DIFFRACTION 2.92Å
e7pr0A1[A:328-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.92Å
e7pr0D1[D:329-525] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.92Å
e7tn0I1[I:332-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: CL,NAG ; X-RAY DIFFRACTION 2.85Å
e7tn0S1[S:331-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: CL,EDO,NAG ; X-RAY DIFFRACTION 2.85Å
e7e9pB1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e7ejyR1[R:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.04Å
e7ejzR1[R:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.63Å
e7ek0R1[R:334-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.70Å
e7engB1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e7f46B1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e7f5gA1[A:334-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: ACT,GOL ; X-RAY DIFFRACTION 1.75Å
e7f5gC1[C:330-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: ACT,GOL ; X-RAY DIFFRACTION 1.75Å
e7fjsE1[E:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.900Å
e7fjsB1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.900Å
e7qezA1[A:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.880Å
e7qf0A1[A:334-528] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; ligands: NA ; X-RAY DIFFRACTION 2.300Å
e7qf1A1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; X-RAY DIFFRACTION 2.800Å
e7qf1F1[F:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.800Å
e7rbyA1[A:334-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.82Å
e7rbyC1[C:334-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: MG,NAG ; X-RAY DIFFRACTION 2.82Å
e7s5pA1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG,SO4 ; X-RAY DIFFRACTION 2.860Å
e7s5qA1[A:332-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: EDO,NAG,SO4 ; X-RAY DIFFRACTION 2.880Å
e7s5rA1[A:334-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: EDO,NAG,SO4 ; X-RAY DIFFRACTION 2.450Å
e7sbuA1[A:336-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.53Å
e7sd5A1[A:335-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 1.53Å
e7si2A1[A:335-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.030Å
e7si2B1[B:335-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.030Å
e7si2C1[C:335-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.030Å
e7swnA1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7swoA1[A:334-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7swpA1[A:334-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7t01A1[A:329-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7tbfA1[A:332-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e7tc9B1[B:332-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7te1E1[E:333-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.5Å
e7tewB1[B:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e7tezB1[B:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e7theA1[A:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7tp3Z1[Z:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: CAC ; X-RAY DIFFRACTION 2.330Å
e7tp4Z1[Z:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: EDO ; X-RAY DIFFRACTION 1.740Å
e7ttmA1[A:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.24Å
e7ttxA1[A:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; X-RAY DIFFRACTION 2.670Å
e7ttyA1[A:334-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.11Å
e7u0dB1[B:331-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Surface glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e7u0nE1[E:334-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.61Å
e7u2dA1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG,SO4 ; X-RAY DIFFRACTION 2.750Å
e7u2eA1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG,SO4 ; X-RAY DIFFRACTION 2.850Å
e7uhbC1[C:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e7urqA1[A:334-529] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; ligands: CIT,NAG ; X-RAY DIFFRACTION 2.05Å
e7ursA1[A:336-526] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; ligands: MPD,NAG,PO4 ; X-RAY DIFFRACTION 2.4Å
e7w6rB1[B:334-529] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
Spike glycoprotein ; ligands: NAG ; X-RAY DIFFRACTION 2.60Å
e7wedE1[E:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7weeE1[E:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e7wefE1[E:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7whhE1[E:333-526] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike glycoprotein ; ligands: NAG ; X-RAY DIFFRACTION 2.60Å
e7wlcE1[E:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7wpbA1[A:328-525] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e7wpcA1[A:329-525] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e7wpcB1[B:328-525] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e7wphA1[A:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.89Å
e7wphB1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.89Å
e7wriB1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e7wrvC1[C:331-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e7ws2A1[A:331-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7ws6C1[C:319-536] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7ws7B1[B:326-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7wsaA1[A:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7wskB1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.3Å
e7wueA1[A:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.200Å
e7wueB1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.200Å
e7x7dD1[D:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.9Å
e7x7dA1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.9Å
e7x7dE1[E:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.9Å
e7x7eC1[C:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: PG4 ; X-RAY DIFFRACTION 2.67Å
e7x7eD1[D:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.67Å
e7x7eF1[F:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.67Å
e7x7oB1[B:334-525] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.75Å
e7xbyB1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: BR,NAG ; X-RAY DIFFRACTION 2.85Å
e7z0xR1[R:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 1.8Å
e7z0yR1[R:333-534] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: SO4 ; X-RAY DIFFRACTION 2.95Å
e7z1aA1[A:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.59Å
e7z1aC1[C:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.59Å
e7z1bA1[A:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.3Å
e7z1bC1[C:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.3Å
e7z1cA1[A:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG,PEG ; X-RAY DIFFRACTION 1.90Å
e7z1cC1[C:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG,PEG ; X-RAY DIFFRACTION 1.90Å
e7z1dEEE1[EEE:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: GOL,NAG ; X-RAY DIFFRACTION 1.55Å
e7z1eEEE1[EEE:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: GOL,NAG,NO3 ; X-RAY DIFFRACTION 1.59Å
e7zf3E1[E:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: GOL ; X-RAY DIFFRACTION 3.15Å
e7zf4E1[E:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 4.18Å
e7zf5E1[E:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 5.3Å
e7zf5A1[A:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 5.3Å
e7zf7B1[B:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.46Å
e7zf8E1[E:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.95Å
e7zf9E1[E:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.25Å
e7zf9C1[C:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.25Å
e7zfbE1[E:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.08Å
e7zfbF1[F:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.08Å
e7zfdE1[E:335-525] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.39Å
e7zfdF1[F:333-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.39Å
e8cwuA1[A:334-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 1.710Å
e8cwvA1[A:334-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.500Å
e8cyjR1[R:333-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e8dadB1[B:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike glycoprotein ; ELECTRON MICROSCOPY
e8dccE1[E:333-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.57Å
e8dceA1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2Å
e8df5R1[R:330-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: CL,EDO,NAG ; X-RAY DIFFRACTION 2.7Å
e8df5S1[S:332-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: CL,EDO,NAG ; X-RAY DIFFRACTION 2.7Å
e8di5C1[C:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e8dlkB1[B:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e8dlnB1[B:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e8dlqB1[B:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e8dlvB1[B:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e8dlyC1[C:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e8dm0C1[C:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e8dv1A1[A:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e8dv2A1[A:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ELECTRON MICROSCOPY
e7f3qA1[A:333-526] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e7f5hA1[A:334-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
SARS-CoV-2 Spike Receptor-Binding Domain (RBD) ; ligands: GOL ; X-RAY DIFFRACTION 3.00Å
e7f5hB1[B:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
SARS-CoV-2 Spike Receptor-Binding Domain (RBD) ; ligands: GOL,PO4 ; X-RAY DIFFRACTION 3.00Å
e7f5rE1[E:335-528] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.01Å
e7f5rC1[C:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; X-RAY DIFFRACTION 3.01Å
e7f5rF1[F:332-528] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; X-RAY DIFFRACTION 3.01Å
e7f6yR1[R:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.0Å
e7f6zR1[R:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 3.0Å
e7fbjA1[A:332-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.850Å
e7fbjC1[C:333-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.850Å
e7fbjE1[E:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.850Å
e7fbjG1[G:333-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.850Å
e7fbjI1[I:333-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.850Å
e7fbjK1[K:333-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.850Å
e7fbjM1[M:333-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.850Å
e7fbjO1[O:333-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.850Å
e7fbkA1[A:334-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 1.900Å
e7fbkB1[B:334-529] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 1.900Å
e7fc5E1[E:334-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.89Å
e7fc6S1[S:321-512] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.655Å
e7fcqA1[A:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: GOL,NAG ; X-RAY DIFFRACTION 1.89Å
e7p19C1[C:337-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.236Å
e7p8iB1[B:334-526] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike glycoprotein ; X-RAY DIFFRACTION 4.49Å
e7p8iD1[D:334-526] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike glycoprotein ; ligands: NAG ; X-RAY DIFFRACTION 4.49Å
e7p8jB1[B:334-526] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike glycoprotein ; X-RAY DIFFRACTION 6.5Å
e7p8jD1[D:334-526] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike glycoprotein ; X-RAY DIFFRACTION 6.5Å
e7qtjA1[A:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Surface glycoprotein ; ELECTRON MICROSCOPY
e7qtjD1[D:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Surface glycoprotein ; ELECTRON MICROSCOPY
e7qtkD1[D:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Surface glycoprotein ; ELECTRON MICROSCOPY
e7ru4A1[A:326-532] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e7t7bA1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.59Å
e7upxA1[A:332-529] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike glycoprotein ; ELECTRON MICROSCOPY
e7v27C1[C:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7voaB1[B:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; X-RAY DIFFRACTION 1.800Å
e7w1sA1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 1.9970Å
e7w8sB1[B:335-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7wa1B1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7wbzA1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 2.400Å
e7wgcC1[C:330-530] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e7whzA1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7wi0A1[A:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7wk0C1[C:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7wk0F1[F:333-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7wm0B1[B:333-526] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
e7wo7C1[C:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7wocC1[C:334-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7wogC1[C:332-528] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7wr8R1[R:334-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7wrlR1[R:334-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7wrzR1[R:335-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ELECTRON MICROSCOPY
e7x1mM1[M:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH
Spike protein S1 ; ELECTRON MICROSCOPY
e7x7tG1[G:333-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7x7uG1[G:333-526] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; ELECTRON MICROSCOPY
e7xazB1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.0Å
e7xazD1[D:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; ligands: NAG ; X-RAY DIFFRACTION 3.0Å
e7xb0B1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.9Å
e7xb1B1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Spike protein S1 ; X-RAY DIFFRACTION 2.7Å
e7xciB1[B:333-527] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
Spike glycoprotein ; ligands: NAG ; ELECTRON MICROSCOPY
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Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes