Evolutionary classification of protein domain structures
alpha arraysalpha-helix arrays with mainly perpendicular helices
alpha bundlesalpha-helix bundles with mainly parallel helices
alpha superhelicesrepeating alpha-helix hairpins form a superhelix
alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain
alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix
beta barrelssingle beta-sheet folded upon itself to form a barrel

Refs: Structure 14, 1489-1498; Current opinion in structural biology 18, 358-365


123654, 3-crossover-4

Representatives:
e2ducA2[A:1-186]
nonrep
Image
Pymol
Jmol Links:
PDB,
SCOP,
CATH, PubMed,
DOI
Replicase polyprotein 1ab ; X-RAY DIFFRACTION 1.7Å
e7s3sA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 860 ; X-RAY DIFFRACTION 2.0Å
e7s4bA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 87H ; X-RAY DIFFRACTION 2.00Å
e7d64A1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: ZN ; X-RAY DIFFRACTION 2.45Å
e7dqzA1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.99Å
e7dqzB1[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.99Å
e7rbzA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4IJ ; X-RAY DIFFRACTION 1.649Å
e7rc0A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4I9 ; X-RAY DIFFRACTION 1.646Å
e7rc1A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4IO,DMS ; X-RAY DIFFRACTION 1.63Å
e7d3cB1[B:1-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.2Å
e7d3cA1[A:1-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.2Å
e7datA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
COVID-19 MAIN PROTEASE ; ligands: AU ; X-RAY DIFFRACTION 2.75Å
e7dauA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
COVID-19 MAIN PROTEASE ; ligands: AU ; X-RAY DIFFRACTION 1.72Å
e7davA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
COVID-19 MAIN PROTEASE ; X-RAY DIFFRACTION 1.77Å
e7ddcA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: H3F ; X-RAY DIFFRACTION 2.175Å
e7dg6A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
Replicase polyprotein 1ab ; X-RAY DIFFRACTION 2.4Å
e7dgbA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: EOF ; X-RAY DIFFRACTION 1.678Å
e7dgfA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: H60 ; X-RAY DIFFRACTION 1.639Å
e7dggA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: H63 ; X-RAY DIFFRACTION 2Å
e7dggB1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: H63 ; X-RAY DIFFRACTION 2Å
e7dghA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: H6F ; X-RAY DIFFRACTION 1.968Å
e7dgiA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: H6L ; X-RAY DIFFRACTION 1.8980Å
e7dgiB1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: H6L ; X-RAY DIFFRACTION 1.8980Å
e7dhjA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: H6R ; X-RAY DIFFRACTION 1.96Å
e7dr8A1[A:2-189] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; X-RAY DIFFRACTION 2.33814917992Å
e7dr8B1[B:2-189] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; X-RAY DIFFRACTION 2.33814917992Å
e7dr9A1[A:3-189] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; X-RAY DIFFRACTION 2.77587097342Å
e7dr9B1[B:4-189] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; X-RAY DIFFRACTION 2.77587097342Å
e7draA1[A:3-189] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; X-RAY DIFFRACTION 2.78Å
e7draB1[B:4-189] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; X-RAY DIFFRACTION 2.78Å
e7e6lA1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.78Å
e7e6lB1[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.78Å
e7e6mA1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.83Å
e7e6mB1[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.83Å
e7e6nA1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.84Å
e7e6nB1[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.84Å
e7e6rA1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.90Å
e7e6rB1[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.90Å
e7eo7A1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.24916621935Å
e7eo7B1[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FNO ; X-RAY DIFFRACTION 2.24916621935Å
e7eo8A1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FNO ; X-RAY DIFFRACTION 2.28Å
e7eo8B1[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.28Å
e7jp0A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; ligands: DMS,VJA ; X-RAY DIFFRACTION 1.65Å
e7ltnA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: YCV ; X-RAY DIFFRACTION 1.787Å
e7mlfA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: C7A ; X-RAY DIFFRACTION 2.6Å
e7mlgA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: ZJ1 ; X-RAY DIFFRACTION 2.5Å
e7ntsA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Replicase polyprotein 1ab ; ligands: DMS,FMT,GOL ; X-RAY DIFFRACTION 1.477Å
e7p51A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 5P9,DMS,NA ; X-RAY DIFFRACTION 1.47Å
e7rfrA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4W8 ; X-RAY DIFFRACTION 1.626Å
e7rfrB1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4W8 ; X-RAY DIFFRACTION 1.626Å
e7rfsA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 1.91Å
e7rfuA1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4YG ; X-RAY DIFFRACTION 2.50Å
e7rfwA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 1.729Å
e7rlsA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 5YN ; X-RAY DIFFRACTION 2.00Å
e7rm2A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 5YJ ; X-RAY DIFFRACTION 2.00Å
e7rmbA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 5Z7 ; X-RAY DIFFRACTION 1.9Å
e7rmeA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 5Z3 ; X-RAY DIFFRACTION 2.00Å
e7rmtA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 5ZN ; X-RAY DIFFRACTION 2.00Å
e7rmzA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 5ZJ ; X-RAY DIFFRACTION 2.1Å
e7rn4A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: H69 ; X-RAY DIFFRACTION 1.85Å
e7rnhA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 5ZW ; X-RAY DIFFRACTION 2.0Å
e7rnkA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 5ZT ; X-RAY DIFFRACTION 2.10Å
e7si9A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 2.00Å
e7t3yA1[A:-1-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: F5L,F8C ; X-RAY DIFFRACTION 1.900Å
e7t3yB1[B:-2-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: F5L,F8C ; X-RAY DIFFRACTION 1.900Å
e7t3zA1[A:-1-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FEY,FHS ; X-RAY DIFFRACTION 1.950Å
e7t3zB1[B:-1-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FEY,FHS ; X-RAY DIFFRACTION 1.950Å
e7t40A1[A:-1-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FV5,FVE,PG4 ; X-RAY DIFFRACTION 1.700Å
e7t41A1[A:-1-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FWI,FZI ; X-RAY DIFFRACTION 2.100Å
e7t42A1[A:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FIK,FIW ; X-RAY DIFFRACTION 1.600Å
e7t42B1[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FIK,FIW,PG4 ; X-RAY DIFFRACTION 1.600Å
e7t43A1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FN2,FP8 ; X-RAY DIFFRACTION 1.700Å
e7t43B1[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FN2,FP8 ; X-RAY DIFFRACTION 1.700Å
e7t44A1[A:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: ESS,ET6 ; X-RAY DIFFRACTION 1.450Å
e7t44B1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: ESS,ET6 ; X-RAY DIFFRACTION 1.450Å
e7t45A1[A:4-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: EW9 ; X-RAY DIFFRACTION 1.650Å
e7t45B1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: EW9,PG4 ; X-RAY DIFFRACTION 1.650Å
e7t46A1[A:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: F5L,F8C ; X-RAY DIFFRACTION 1.450Å
e7t46B1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: F5L,F8C ; X-RAY DIFFRACTION 1.450Å
e7t48A1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FEY,FHS ; X-RAY DIFFRACTION 1.900Å
e7t49A1[A:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FV5,FVE ; X-RAY DIFFRACTION 1.750Å
e7t49B1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FV5,FVE ; X-RAY DIFFRACTION 1.750Å
e7t4aA1[A:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: EO6,EQS ; X-RAY DIFFRACTION 1.800Å
e7t4aB1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: EO6,EQS,PG4,PO4 ; X-RAY DIFFRACTION 1.800Å
e7t4bA1[A:4-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FWI,FZI ; X-RAY DIFFRACTION 1.600Å
e7t4bB1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: FWI,FZI,PG4 ; X-RAY DIFFRACTION 1.600Å
e7vh8A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4WI,H2S ; X-RAY DIFFRACTION 1.590Å
e7tobA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: K36,PEG ; X-RAY DIFFRACTION 2.050Å
e7dvpA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.690Å
e7te0A2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 2.00Å
e7nwxA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Replicase polyprotein 1a ; ligands: ZN ; X-RAY DIFFRACTION 1.80Å
e7vjwA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.200Å
e7vjxA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.200Å
e7vk0A2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.100Å
e7vk3A2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.100Å
e7vk4A2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.100Å
e7vk5A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.100Å
e7vk6A2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.200Å
e7vk7A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.200Å
e7dvwA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: DMS ; X-RAY DIFFRACTION 1.490Å
e7dvxA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.7970Å
e7dvyA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.7950Å
e7dw0A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.810Å
e7dw6A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.6950Å
e7nxhA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.10Å
e7vjyA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 1.700Å
e7vjzA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 1.900Å
e7vk1A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 1.600Å
e7vk2A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.000Å
e7vk8A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.400Å
e7tllA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 1.63Å
e7tllB1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 1.63Å
e7vjwB1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.200Å
e7vjxB2[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.200Å
e7vk0B2[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.100Å
e7vk3B1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.100Å
e7vk4B2[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.100Å
e7vk5B1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.100Å
e7vk6B2[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.200Å
e7vk7B1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; X-RAY DIFFRACTION 2.200Å
e7rnwB1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.350Å
e7s82A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; ELECTRON MICROSCOPY
e7au4A2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,RY5 ; X-RAY DIFFRACTION 1.820Å
e7u29A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 2.09Å
e7e5xA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.190Å
e7tvsA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase nsp5 ; ligands: DMS,XNJ ; X-RAY DIFFRACTION 1.88Å
e7tq6B2[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: IT3,ITG,PG4 ; X-RAY DIFFRACTION 1.550Å
e7vtcB1[B:1-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.53865625155Å
e7tq7A1[A:-1-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Orf1a protein ; ligands: IRR,PG4 ; X-RAY DIFFRACTION 1.700Å
e7tq8A2[A:-1-189] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Orf1a protein ; ligands: IRK,IUB,PG4 ; X-RAY DIFFRACTION 1.650Å
e7s82B2[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; ELECTRON MICROSCOPY
e8dg3A1[A:0-186] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: 4WI
e8dg3B2[B:0-186] Image Pymol Jmol Links: PDB, SCOP, CATH
; ligands: 4WI
e7mb5B1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.60Å
e7mb6B1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.21Å
e7mb7A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.02Å
e7mb8D2[D:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.62Å
e7mb9A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.81Å
e7t2uA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-Like Protease ; X-RAY DIFFRACTION 2.100Å
e7t2uD2[D:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-Like Protease ; X-RAY DIFFRACTION 2.100Å
e7t2vA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-Like Protease ; X-RAY DIFFRACTION 2.470Å
e7t2vD2[D:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-Like Protease ; X-RAY DIFFRACTION 2.470Å
e7t9yA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: GOL ; X-RAY DIFFRACTION 2.18Å
e7ta4A2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 1.78Å
e7nijA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.580Å
e7tq5A1[A:4-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: IRW,ITX ; X-RAY DIFFRACTION 1.650Å
e7vfaE1[E:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: SO4 ; X-RAY DIFFRACTION 1.75Å
e7vloB2[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 2.02Å
e7vvtA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 80X ; X-RAY DIFFRACTION 2.500Å
e8doyA1[A:0-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: 1PE,DMS,MES,PG0,T1X ; X-RAY DIFFRACTION 1.59Å
e8doyB2[B:0-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,PG0,T1X ; X-RAY DIFFRACTION 1.59Å
e8e61B2[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; ligands: CL,VLU,VM0 ; X-RAY DIFFRACTION 1.850Å
e8e64A2[A:4-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; ligands: WEL ; X-RAY DIFFRACTION 1.750Å
e7v7mA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; X-RAY DIFFRACTION 2.08Å
e7wypA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: G7O ; X-RAY DIFFRACTION 2.30Å
e7vlqB1[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4WI ; X-RAY DIFFRACTION 1.93910601486Å
e8czwB2[B:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: P8L,P8U ; X-RAY DIFFRACTION 1.700Å
e8e68B2[B:3-186] Image Pymol Jmol Links: PDB, SCOP, CATHDOI
3C-like proteinase ; ligands: PG4,WGO,WGU ; X-RAY DIFFRACTION 1.600Å
e7qbbA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,V1B ; X-RAY DIFFRACTION 2.000Å
e7qt6A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,RZJ ; X-RAY DIFFRACTION 2.11Å
e7qt7A2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,UHV ; X-RAY DIFFRACTION 2.25Å
e7qt9A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Non-structural protein 6 ; ligands: DMS,UJ1 ; X-RAY DIFFRACTION 2.43Å
e7rnwC2[C:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; X-RAY DIFFRACTION 2.350Å
e7tgrA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: B1S,CL,K36,NA ; X-RAY DIFFRACTION 1.680Å
e7vlpA2[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
Replicase polyprotein 1a ; ligands: 4WI ; X-RAY DIFFRACTION 1.50Å
e7z0pAAA2[AAA:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: I8H,NA ; X-RAY DIFFRACTION 2.52Å
e8d4nA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; X-RAY DIFFRACTION 2.70Å
e8dd9A2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: B1S ; X-RAY DIFFRACTION 2.04Å
e7b2jA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,PEG,SQ2 ; X-RAY DIFFRACTION 1.55Å
e7b2uA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,SQ5 ; X-RAY DIFFRACTION 1.55Å
e7b2uB1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,SQ5 ; X-RAY DIFFRACTION 1.55Å
e7b5zA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,SYH ; X-RAY DIFFRACTION 1.65Å
e7b77A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,T0W ; X-RAY DIFFRACTION 1.60Å
e7bijAAA1[AAA:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,TU8 ; X-RAY DIFFRACTION 1.47Å
e7e6kA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; ligands: DMS,HYR,SO4 ; X-RAY DIFFRACTION 1.600Å
e7nbtAAA2[AAA:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,U7W ; X-RAY DIFFRACTION 1.63Å
e7neoAAA1[AAA:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,U9H ; X-RAY DIFFRACTION 1.64Å
e7neoBBB1[BBB:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,U9H ; X-RAY DIFFRACTION 1.64Å
e7ntqA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 35J,DMS,FMT,NA ; X-RAY DIFFRACTION 1.49Å
e7ntwA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
3C-like proteinase ; ligands: DMS,FMT,NA,ZN ; X-RAY DIFFRACTION 1.815Å
e7p2gA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: 4N0 ; X-RAY DIFFRACTION 2.5Å
e7qt5A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: DMS,GWS ; X-RAY DIFFRACTION 2.26Å
e7qt8A1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: R8H ; X-RAY DIFFRACTION 2.01Å
e7qt8B1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase ; ligands: R8H ; X-RAY DIFFRACTION 2.01Å
e7u29B1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 2.09Å
e8d4jB2[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.78Å
e8d4kA1[A:2-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: K36 ; X-RAY DIFFRACTION 1.89Å
e8d4lA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.70Å
e8d4lB1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; X-RAY DIFFRACTION 1.70Å
e8d4mA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: K36 ; X-RAY DIFFRACTION 1.81Å
e8d4nB2[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; X-RAY DIFFRACTION 2.70Å
e8dczA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 2.38Å
e8dczB2[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 2.38Å
e8ddmA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: K36 ; X-RAY DIFFRACTION 2.78Å
e8dfnA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; X-RAY DIFFRACTION 2.04Å
e8dgbA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: B1S ; X-RAY DIFFRACTION 2.87Å
e8dgbB2[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: B1S ; X-RAY DIFFRACTION 2.87Å
e8dz9D2[D:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI
3C-like proteinase nsp5 ; ligands: 4WI ; X-RAY DIFFRACTION 1.66Å
e7pflA1[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
Replicase polyprotein 1ab ; ligands: NA ; X-RAY DIFFRACTION 1.800Å
e7pfmA2[A:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
Replicase polyprotein 1ab ; ligands: 7IL ; X-RAY DIFFRACTION 2.000Å
e7pfmB1[B:1-186] Image Pymol Jmol Links: PDB, SCOP, CATH
Replicase polyprotein 1ab ; ligands: 7IL ; X-RAY DIFFRACTION 2.000Å
Previous Next
Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.
beta meanderssingle beta-sheet with mainly meander topology
beta sandwichestwo beta-sheets stacked together to form a sandwich
beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain
beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander
a+b two layersone alpha-helix layer and one beta-sheet layer
a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers
a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers
a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers
a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain
a/b barrelsrepeating beta-alpha units form a barrel
a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers
mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions
few secondary structure elementsstabilized by cofactors or disulfides
extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes