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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative


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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

X: Ribosomal protein L13/L15p/L18e/L32e
H: Ribosomal proteins L15p and L18e
T: Ribosomal proteins L15p and L18e
F: Ribosomal_L27A

PF00828 CL0588

Representatives:

e1vqoL1[L:1-150] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L15P ; ligands: CL,NA,SR ; X-RAY DIFFRACTION 2.2Å

e8agwN1[N:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ligands: SPD ; ELECTRON MICROSCOPY

e8agxN1[N:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ligands: SPD ; ELECTRON MICROSCOPY

e8agzN1[N:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ligands: SPD ; ELECTRON MICROSCOPY

e8bipLa1[La:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ligands: MG ; ELECTRON MICROSCOPY

e8bjqLa1[La:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ligands: MG ; ELECTRON MICROSCOPY

e7zpqBZ1[BZ:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e7zrsBZ1[BZ:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e7zs5Bb1[Bb:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e7zuwBZ1[BZ:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e7zuxEZ1[EZ:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e8euga1[a:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28-A ; ELECTRON MICROSCOPY

e8euia1[a:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28-A ; ELECTRON MICROSCOPY

e7qcaLAA1[LAA:1-147] Image Pymol Jmol Links: PDB, SCOP, CATH

uL15 LAA ; ligands: K ; ELECTRON MICROSCOPY

e7qjhLAA1[LAA:1-147] Image Pymol Jmol Links: PDB, SCOP, CATH

e7qjhKAA1[KAA:1-147] Image Pymol Jmol Links: PDB, SCOP, CATH

e8b5la1[a:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: MG ; ELECTRON MICROSCOPY

e8b6ca1[a:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: MG ; ELECTRON MICROSCOPY

e7qggb1[b:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: MG ; ELECTRON MICROSCOPY

e7tm3a1[a:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL15 ; ligands: MG ; ELECTRON MICROSCOPY

e7tuta1[a:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL15 ; ligands: MG ; ELECTRON MICROSCOPY

e7zjwLd1[Ld:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: MG,SER ; ELECTRON MICROSCOPY

e8esqa1[a:69-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28-A ; ELECTRON MICROSCOPY

e8etca1[a:2-15,a:69-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28-A ; ELECTRON MICROSCOPY

e8etga1[a:2-15,a:69-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28-A ; ELECTRON MICROSCOPY

e8etja1[a:2-15,a:69-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28-A ; ELECTRON MICROSCOPY

e7u0ha1[a:58-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e8a3dU1[U:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: K,MG ; ELECTRON MICROSCOPY

e8bqdAR1[AR:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e8bqxAR1[AR:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e8hfraw1[aw:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH

60S ribosomal protein L28 ; ligands: MG ; ELECTRON MICROSCOPY

e7z3nLa1[La:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28-like protein ; ligands: MG ; ELECTRON MICROSCOPY

e7z3oLa1[La:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28-like protein ; ELECTRON MICROSCOPY

e8br3LAA1[LAA:1-147] Image Pymol Jmol Links: PDB, SCOP, CATH

e8btkBa1[Ba:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: MG,SPD ; ELECTRON MICROSCOPY

e7uooa1[a:58-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e7uqba1[a:58-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e7uqza1[a:58-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e7v08a1[a:58-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

e8br8Lb1[Lb:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L27a ; ELECTRON MICROSCOPY

e8brmLb1[Lb:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L27a ; ELECTRON MICROSCOPY

e8bsiLb1[Lb:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L27a ; ELECTRON MICROSCOPY

e8bsjLb1[Lb:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L27a ; ELECTRON MICROSCOPY

e8btdLb1[Lb:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L27a ; ELECTRON MICROSCOPY

e8btrLb1[Lb:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

Ribosomal protein L27a ; ELECTRON MICROSCOPY

e8g5yLa1[La:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: K,MET,SPD ; ELECTRON MICROSCOPY

e8g5zLa1[La:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: K,MET,MG,PHE,SPD ; ELECTRON MICROSCOPY

e8g60La1[La:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL15 ; ligands: MET,MG,PHE,SPD ; ELECTRON MICROSCOPY

e8g61La1[La:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: MET,MG,SPD ; ELECTRON MICROSCOPY

e8g6jLa1[La:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: K,MET,MG,PHE,SPD ; ELECTRON MICROSCOPY

e8glpLa1[La:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: K,MET,MG,SPD ; ELECTRON MICROSCOPY

e7xnxLa1[La:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27 ; ligands: MG ; ELECTRON MICROSCOPY

e7xnyLa1[La:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: MG ; ELECTRON MICROSCOPY

e8hkuL15P1[L15P:39-144] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8hkyL15P1[L15P:39-144] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8hl2L15P1[L15P:39-144] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L15 ; ELECTRON MICROSCOPY

e8hl5L15P1[L15P:39-144] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8hkuL18E1[L18E:6-117] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8hkyL18E1[L18E:6-117] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8hl2L18E1[L18E:6-117] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L18e ; ELECTRON MICROSCOPY

e8hl5L18E1[L18E:6-117] Image Pymol Jmol Links: PDB, SCOP, CATH

; ELECTRON MICROSCOPY

e8eubAa1[Aa:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: MG ; ELECTRON MICROSCOPY

e8ccsM1[M:2-149] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ligands: SPD ; ELECTRON MICROSCOPY

e8q5iAB1[AB:2-149] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

; ligands: MG,SPD ; ELECTRON MICROSCOPY

e8azwf1[f:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: K,SPD ; ELECTRON MICROSCOPY

e8b2lf31[f3:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

uL15 (60S ribosomal protein L27a) ; ligands: K,SPD ; ELECTRON MICROSCOPY

e8p5dLAA1[LAA:1-147] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8bpoZ21[Z2:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: MG ; ELECTRON MICROSCOPY

e8p2kBa1[Ba:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: MG,SPD,UNX ; ELECTRON MICROSCOPY

e8bhfN11[N1:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ligands: MG ; ELECTRON MICROSCOPY

e8a98L1[L:2-145] Image Pymol Jmol Links: PDB, SCOP, CATH

Putative 60S ribosomal protein L27A/L29 ; ELECTRON MICROSCOPY

e8fkpLK1[LK:2-17,LK:57-148] Image Pymol Jmol Links: PDB, SCOP, CATHDOI

; ligands: MG ; ELECTRON MICROSCOPY

e8fl2LK1[LK:2-25,LK:56-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8fl6LK1[LK:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8idtL1[L:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ir1L1[L:2-21,L:56-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e5aj0Aa1[Aa:2-148] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L27a ; ligands: MG ; ELECTRON MICROSCOPY

Previous

e1vqoO1[O:1-115] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S RIBOSOMAL PROTEIN L18E ; ligands: CD,CL ; X-RAY DIFFRACTION 2.2Å

e1vw4J1[J:58-277] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e2j01P1[P:5-150] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e3j9zLH1[LH:1-144] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L15 ; ELECTRON MICROSCOPY

e3jcta1[a:57-149] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L28 ; ELECTRON MICROSCOPY

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes