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X - Possible homology level

H - Homology level

T - Topology level

F - Family level

* - Provisional representative

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Evolutionary classification of protein domain structures

alpha arraysalpha-helix arrays with mainly perpendicular helices

alpha bundlesalpha-helix bundles with mainly parallel helices

alpha superhelicesrepeating alpha-helix hairpins form a superhelix

alpha duplicates or obligate multimersalpha duplicates or monomers associate together to form a compact domain

alpha complex topologyalpha domain with complex and unique topology that cannot be described as array or bundle or superhelix

beta barrelssingle beta-sheet folded upon itself to form a barrel

beta meanderssingle beta-sheet with mainly meander topology

beta sandwichestwo beta-sheets stacked together to form a sandwich

beta duplicates or obligate multimersbeta duplicates or monomers associate together to form a compact domain

beta complex topologybeta domains with complex and unique topology that cannot be described as barrel or sandwich or meander

a+b two layersone alpha-helix layer and one beta-sheet layer

a+b three layersone mainly antiparallel beta-sheet layer sandwiched between two alpha-helix layers

X: Bacillus chorismate mutase-like
H: L30e-like
T: L30e-like
F: Ribosomal_L7Ae

PF01248 CL0101

Representatives:

e1xbiA1[A:2-116] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

50S ribosomal protein L7Ae ; ligands: EPE ; X-RAY DIFFRACTION 1.44Å

e2bo1A1[A:1-100] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH

50S RIBOSOMAL PROTEIN L30E ; ligands: SO4 ; X-RAY DIFFRACTION 1.7Å

e2aleA1[A:1-126] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

NHP2/L7AE FAMILY PROTEIN YEL026W ; ligands: MG ; X-RAY DIFFRACTION 1.8Å

e3j65H1[H:24-256] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

e8cdlKK1[KK:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8cdrKK1[KK:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8cehKK1[KK:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8cf5KK1[KK:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8cg8KK1[KK:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8cgnKK1[KK:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8civKK1[KK:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8ckuKK1[KK:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8cmjKK1[KK:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8evpAG1[AG:24-253] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8evqAG1[AG:24-253] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8evrAG1[AG:24-253] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8evsAG1[AG:24-253] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8evtAG1[AG:24-253] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ewbAG1[AG:24-253] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e8ewcAG1[AG:24-253] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

; ELECTRON MICROSCOPY

e5gakK1[K:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e5m1jG51[G5:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e5mc6AA1[AA:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e5tgmL81[L8:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ligands: LEU,OHX,PHE ; X-RAY DIFFRACTION 3.500Å

e5tgml81[l8:24-254] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ligands: LEU,MG,OHX,PHE ; X-RAY DIFFRACTION 3.500Å

e7of1G1[G:24-248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7oh3G1[G:24-251] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7ohpG1[G:70-233] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7ohqG1[G:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7ohrG1[G:50-238] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7ohsG1[G:70-233] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7ohuG1[G:70-233] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7ohvG1[G:50-238] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7ohwG1[G:70-233] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7osaeL81[eL8:24-252] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ligands: MG ; X-RAY DIFFRACTION 3.0Å

e7osmeL81[eL8:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; X-RAY DIFFRACTION 3.0Å

e7rr5LG1[LG:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8aafp1[p:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8agtp1[p:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8agup1[p:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8agvp1[p:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8agwp1[p:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8agxp1[p:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8agzp1[p:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8bipLG1[LG:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8bjqLG1[LG:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e8esqG1[G:50-259] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8 ; ELECTRON MICROSCOPY

e8esrG1[G:50-259] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8 ; ELECTRON MICROSCOPY

e8etcG1[G:51-236] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8 ; ELECTRON MICROSCOPY

e8etiG1[G:52-237] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8 ; ELECTRON MICROSCOPY

e8eugG1[G:23-252] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8 ; ELECTRON MICROSCOPY

e8euiG1[G:23-251] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8 ; ELECTRON MICROSCOPY

e7nacG1[G:46-248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7r6qG1[G:46-249] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7r7aG1[G:46-248] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7ug6G1[G:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7zpqBG1[BG:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7zrsBG1[BG:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7zs5BI1[BI:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e7zuwBG1[BG:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8 ; ELECTRON MICROSCOPY

e7zuxEG1[EG:24-256] Image Pymol Jmol Links: PDB, SCOP, CATH, PubMed, DOI

60S ribosomal protein L8-A ; ELECTRON MICROSCOPY

e4cxdG1[G:29-263] nonrep Image Pymol Jmol Links: PDB, SCOP, CATH Obsolete PDB

F: Unmapped domains

Pseudo group of domains that do not map to PFam family profiles. Domains inside should not be considered as in one family.

a+b four layerstwo beta-sheet layers sandwiched between two alpha-helix layers

a+b complex topologyalpha and beta domain with complex and unique topology that cannot be described in layers

a+b duplicates or obligate multimersalpha and beta duplicates or monomers associated together to form a compact domain

a/b barrelsrepeating beta-alpha units form a barrel

a/b three-layered sandwichesrepeating beta-alpha units form a sandwich with a mainly parallel beta-sheet layer stacked between two alpha-helix layers

mixed a+b and a/balpha and beta domain consists of both a+b and a/b regions

few secondary structure elementsstabilized by cofactors or disulfides

extended segmentsextended, non-globular segments, frequently bind to other proteins to form complexes