UDP
URIDINE-5'-DIPHOSPHATErna linking
- Formula
- C9 H14 N2 O12 P2
- Weight
- 404.16 Da
- Type
- RNA LINKING
- Release
- REL
680
PDB entries
1,693
ECOD domains in contact
1,742
Contacts (≤ 4 Å)
Top-binding ECOD families
| F-group | Family | Domains |
|---|---|---|
| 7512.1.1.0 | — | 163 |
| 7512.1.1.1 | UDPGT | 133 |
| 7516.1.1.17 | Glyco_transf_6 | 109 |
| 7512.1.1.3 | Glycos_transf_1 | 97 |
| 2004.1.1.70 | dNK | 88 |
| 7512.1.1.33 | Glyco_transf_41 | 79 |
| 7512.1.1.6 | Glyco_transf_20 | 74 |
| 7512.1.1.8 | Epimerase_2 | 67 |
| 244.1.1.0 | — | 61 |
| 7516.1.1.3 | Glycos_transf_2,Glyco_transf_7C | 47 |
| 7516.1.1.13 | Glyco_transf_7C,Glyco_transf_7N | 41 |
| 7516.1.1.2 | Glycos_transf_2 | 40 |
| 2003.1.1.20 | Epimerase | 40 |
| 304.34.1.1 | NDK | 36 |
| 2003.1.2.18 | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | 32 |
| 7531.1.1.1 | AA_kinase | 32 |
| 7512.1.1.77 | Glyco_transf_N | 30 |
| 7516.1.1.6 | Glyco_transf_8 | 29 |
| 7512.1.1.30 | Glyco_transf_4 | 28 |
| 7516.1.1.8 | Galactosyl_T | 25 |
PDB entries containing UDP
| PDB | Chains | Instances |
|---|---|---|
| 3ruf | A, b, B, S | 4 |
| 3s27 | A, B, C, D, E, F, G, H | 8 |
| 3s28 | A, B, C, D, E, F, G, H | 8 |
| 3s29 | A, B, C, D, E, F, G, H | 8 |
| 3sx3 | A | 1 |
| 3sx5 | A | 1 |
| 3sx7 | A | 1 |
| 3sx8 | A | 1 |
| 3sxa | A | 1 |
| 3sxb | A | 1 |
| 3sxc | A | 1 |
| 3sxd | A | 1 |
| 3sxe | A | 1 |
| 3sxg | A | 1 |
| 3t7m | A, B | 2 |
| 3t7n | A, B | 2 |
| 3tax | A, C | 2 |
| 3u0y | A, B | 2 |
| 3u2u | A, B | 2 |
| 3u2v | A, B | 2 |