UDP
URIDINE-5'-DIPHOSPHATErna linking
- Formula
- C9 H14 N2 O12 P2
- Weight
- 404.16 Da
- Type
- RNA LINKING
- Release
- REL
680
PDB entries
1,693
ECOD domains in contact
1,742
Contacts (≤ 4 Å)
Top-binding ECOD families
| F-group | Family | Domains |
|---|---|---|
| 7512.1.1.0 | — | 163 |
| 7512.1.1.1 | UDPGT | 133 |
| 7516.1.1.17 | Glyco_transf_6 | 109 |
| 7512.1.1.3 | Glycos_transf_1 | 97 |
| 2004.1.1.70 | dNK | 88 |
| 7512.1.1.33 | Glyco_transf_41 | 79 |
| 7512.1.1.6 | Glyco_transf_20 | 74 |
| 7512.1.1.8 | Epimerase_2 | 67 |
| 244.1.1.0 | — | 61 |
| 7516.1.1.3 | Glycos_transf_2,Glyco_transf_7C | 47 |
| 7516.1.1.13 | Glyco_transf_7C,Glyco_transf_7N | 41 |
| 7516.1.1.2 | Glycos_transf_2 | 40 |
| 2003.1.1.20 | Epimerase | 40 |
| 304.34.1.1 | NDK | 36 |
| 2003.1.2.18 | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | 32 |
| 7531.1.1.1 | AA_kinase | 32 |
| 7512.1.1.77 | Glyco_transf_N | 30 |
| 7516.1.1.6 | Glyco_transf_8 | 29 |
| 7512.1.1.30 | Glyco_transf_4 | 28 |
| 7516.1.1.8 | Galactosyl_T | 25 |
PDB entries containing UDP
| PDB | Chains | Instances |
|---|---|---|
| 5djs | A, B, C, D | 4 |
| 5dld | A | 1 |
| 5e9u | A, E | 2 |
| 5ejz | A | 1 |
| 5eke | A, B, C, D | 4 |
| 5ekp | A, B, C, D | 4 |
| 5enz | A, B | 2 |
| 5eqd | B | 1 |
| 5eqf | A, B | 2 |
| 5er9 | A, B | 2 |
| 5f84 | A | 1 |
| 5f85 | A | 1 |
| 5f87 | A, B, C, D, E, F | 6 |
| 5fv9 | A, B, C, D, E, F | 6 |
| 5ggi | A, B | 2 |
| 5gvv | A, F | 2 |
| 5gy7 | A, B | 2 |
| 5h60 | A | 1 |
| 5h62 | A, B | 2 |
| 5hgv | A, C | 2 |