UDP
URIDINE-5'-DIPHOSPHATErna linking
- Formula
- C9 H14 N2 O12 P2
- Weight
- 404.16 Da
- Type
- RNA LINKING
- Release
- REL
680
PDB entries
1,693
ECOD domains in contact
1,742
Contacts (≤ 4 Å)
Top-binding ECOD families
| F-group | Family | Domains |
|---|---|---|
| 7512.1.1.0 | — | 163 |
| 7512.1.1.1 | UDPGT | 133 |
| 7516.1.1.17 | Glyco_transf_6 | 109 |
| 7512.1.1.3 | Glycos_transf_1 | 97 |
| 2004.1.1.70 | dNK | 88 |
| 7512.1.1.33 | Glyco_transf_41 | 79 |
| 7512.1.1.6 | Glyco_transf_20 | 74 |
| 7512.1.1.8 | Epimerase_2 | 67 |
| 244.1.1.0 | — | 61 |
| 7516.1.1.3 | Glycos_transf_2,Glyco_transf_7C | 47 |
| 7516.1.1.13 | Glyco_transf_7C,Glyco_transf_7N | 41 |
| 7516.1.1.2 | Glycos_transf_2 | 40 |
| 2003.1.1.20 | Epimerase | 40 |
| 304.34.1.1 | NDK | 36 |
| 2003.1.2.18 | Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain | 32 |
| 7531.1.1.1 | AA_kinase | 32 |
| 7512.1.1.77 | Glyco_transf_N | 30 |
| 7516.1.1.6 | Glyco_transf_8 | 29 |
| 7512.1.1.30 | Glyco_transf_4 | 28 |
| 7516.1.1.8 | Galactosyl_T | 25 |
PDB entries containing UDP
| PDB | Chains | Instances |
|---|---|---|
| 8y2l | A, B, C | 3 |
| 8yh1 | A, B, C, D, I | 5 |
| 8yrl | A, B | 2 |
| 8z0o | A, B | 2 |
| 8zgc | A, B, U, V | 4 |
| 8zge | A, B, U, V | 4 |
| 8zgg | A, B | 2 |
| 8zly | A, B, C, D, E, F, G | 7 |
| 8znk | A, B | 2 |
| 8zwp | A, B | 2 |
| 8zww | A, B | 2 |
| 8zwy | A, B | 2 |
| 8zx3 | A, B | 2 |
| 8zx8 | A, B | 2 |
| 8zx9 | A, B | 2 |
| 9ar1 | B | 1 |
| 9asc | A, B, C, D | 4 |
| 9bhe | A, B, C, D | 4 |
| 9crz | A, B | 2 |
| 9dcm | B, C | 2 |