ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ksjA1 - ECOD Domain | ECOD

ECOD/Domains/e1ksjA1

e1ksjA1

UID: 000101412

PDB

Range: A:17-176
PDB: 1KSJ chain A(all domains)
UniProt: Q9D0J4 (all domains)
Gene: Arl2

Molecule: arf-like protein 2

3D Structure

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Related Domains

Browse other domains in Arf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyArf(2004.1.1.16)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

Pfam Families

ADP-ribosylation factor family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1KSJ RCSB PDB: 1KSJ PDBe: 1KSJ UniProt: Q9D0J4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Guanosine-5'-Triphosphate

drugDrugBank DB04137

Magnesium ionMG

metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.