GDP
GUANOSINE-5'-DIPHOSPHATErna linking
- Formula
- C10 H15 N5 O11 P2
- Weight
- 443.20 Da
- Type
- RNA LINKING
- Release
- REL
2,418
PDB entries
9,702
ECOD domains in contact
10,032
Contacts (≤ 4 Å)
Top-binding ECOD families
| F-group | Family | Domains |
|---|---|---|
| 2003.1.6.1 | Tubulin | 4,861 |
| 301.6.1.1 | Tubulin_C | 1,385 |
| 2004.1.1.19 | Ras | 989 |
| 2004.1.1.14 | GTP_EFTU | 228 |
| 2003.1.6.0 | — | 218 |
| 135.1.1.1 | G-alpha | 137 |
| 2004.1.1.47 | G-alpha | 125 |
| 2004.1.1.16 | Arf | 113 |
| 2004.1.1.54 | Septin | 74 |
| 2004.1.1.36 | Dynamin_N | 68 |
| 2004.1.1.172 | DAP3 | 62 |
| 2004.1.1.414 | GTP_EFTU, MMR_HSR1 | 62 |
| 7512.1.1.37 | FUT8_N_cat | 58 |
| 1074.1.1.2 | Ribonuc_red_lgN,RNR_N | 58 |
| 2003.1.6.7 | Tubulin, Misat_Tub_SegII | 48 |
| 304.34.1.1 | NDK | 48 |
| 2004.1.1.81 | GBP | 47 |
| 2004.1.1.73 | MMR_HSR1 | 43 |
| 2004.1.1.119 | Gtr1_RagA | 40 |
| 2004.1.1.0 | — | 40 |
PDB entries containing GDP
| PDB | Chains | Instances |
|---|---|---|
| 10jt | A, B | 2 |
| 10nu | A, B | 2 |
| 10nv | A, B | 2 |
| 10sw | A, B, C, D, E, F, G, H | 10 |
| 11qe | A | 1 |
| 13bv | A | 1 |
| 1a4r | A | 1 |
| 1aa9 | A | 1 |
| 1agr | A, D | 2 |
| 1an0 | A, B | 2 |
| 1as2 | A | 1 |
| 1as3 | A | 1 |
| 1bhn | A, B, C, D, E, F | 6 |
| 1bof | A | 1 |
| 1byu | A, B | 2 |
| 1cc0 | A, C | 2 |
| 1cg0 | A | 1 |
| 1cg1 | A | 1 |
| 1cg3 | A | 1 |
| 1cg4 | A | 1 |
Page 1 of 121 (2,418 total)