ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2cnwA2 - ECOD Domain | ECOD

ECOD/Domains/e2cnwA2

e2cnwA2

UID: 000102073

PDB

Range: A:89-293
PDB: 2CNW chain A(all domains)
UniProt: O07347 (all domains)
Gene: ffh

Molecule: SIGNAL RECOGNITION PARTICLE PROTEIN

3D Structure

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Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-Monophosphate5GP
drugDrugBank DB01972
Tetrafluoroaluminate IonALF
drugDrugBank DB04444

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2CNW RCSB PDB: 2CNW PDBe: 2CNW UniProt: O07347

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Guanosine-5'-Diphosphate

drugDrugBank DB04315

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.