ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yraB1 - ECOD Domain | ECOD

ECOD/Domains/e1yraB1

e1yraB1

UID: 000102115

PDB

Range: B:1-244
PDB: 1YRA chain B(all domains)
UniProt: Q9UYR9 (all domains)
Gene: PYRAB14380

Molecule: ATP(GTP)binding protein

3D Structure

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Related Domains

Browse other domains in ATP_bind_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyATP_bind_1(2004.1.1.94)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03029ATP_bind_1

Conserved hypothetical ATP binding protein

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1YRA RCSB PDB: 1YRA PDBe: 1YRA UniProt: Q9UYR9

Downloads

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