ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4l1jA1 - ECOD Domain | ECOD

ECOD/Domains/e4l1jA1

e4l1jA1

UID: 001063858

PDB

Range: A:13-200
PDB: 4L1J chain A(all domains)
UniProt: Q7Z4H3 (all domains)
Gene: HDDC2

Molecule: HD domain-containing protein 2

3D Structure

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Related Domains

Browse other domains in HD_3 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupHD-domain/PDEase-like(131.1)

TT-groupHD-domain/PDEase-like(131.1.1)

FFamilyHD_3(131.1.1.10)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

HD domain

ClanCL0237HD_PDEase

External Links

ECOD PDB View: 4L1J RCSB PDB: 4L1J PDBe: 4L1J UniProt: Q7Z4H3

Downloads

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