ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4b8rA1 - ECOD Domain | ECOD

ECOD/Domains/e4b8rA1

e4b8rA1

UID: 001065861

PDB

Range: A:1-467
PDB: 4B8R chain A(all domains)
UniProt: Q7M537 (all domains)
Gene: glkA

Molecule: ADP-DEPENDENT GLUCOKINASE

3D Structure

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Related Domains

Browse other domains in ADP_PFK_GK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRibokinase-like(2003.6)

TT-groupRibokinase-like(2003.6.1)

FFamilyADP_PFK_GK(2003.6.1.4)

Ligands

in contact, ≤ 4 Å

1,4-DithiothreitolDTT
drugDrugBank DB04447

+ 5 additives (Glycerin, Triethylene glycol, Sulfate ion, …)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF04587ADP_PFK_GK

ADP-specific Phosphofructokinase/Glucokinase conserved region

ClanCL0118Ribokinase

External Links

ECOD PDB View: 4B8R RCSB PDB: 4B8R PDBe: 4B8R UniProt: Q7M537

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Triethylene glycolPGE

DrugBank DB02327

Sulfate ionSO4

DrugBank DB14546

TromethamineTRS

DrugBank DB03754

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.