ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lg1A1 - ECOD Domain | ECOD

ECOD/Domains/e4lg1A1

e4lg1A1

UID: 001067599

PDB

Range: A:11-228
PDB: 4LG1 chain A(all domains)
UniProt: Q9H867 (all domains)
Gene: VCPKMT

Molecule: Protein-lysine methyltransferase METTL21D

3D Structure

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Related Domains

Browse other domains in Methyltransf_16 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_16(2003.1.5.73)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
Unknown atom or ionUNX

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOL

Pfam Families

PF10294Methyltransf_16

Lysine methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4LG1 RCSB PDB: 4LG1 PDBe: 4LG1 UniProt: Q9H867

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.