ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4j5yD1 - ECOD Domain | ECOD

ECOD/Domains/e4j5yD1

e4j5yD1

UID: 001086407

PDB

Range: D:5-72
PDB: 4J5Y chain D(all domains)
UniProt: Q9HUM0 (all domains)
Gene: hfq

Molecule: Protein hfq

3D Structure

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Related Domains

Browse other domains in Hfq →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyHfq(4.1.1.96)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Sodium ionNA
metal

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Pfam Families

Hfq protein

ClanCL0986Sm-like

External Links

ECOD PDB View: 4J5Y RCSB PDB: 4J5Y PDBe: 4J5Y UniProt: Q9HUM0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.