ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lg8A1 - ECOD Domain | ECOD

ECOD/Domains/e4lg8A1

e4lg8A1

UID: 001088372

RepresentativePDB

Range: A:195-504
PDB: 4LG8 chain A(all domains)
UniProt: Q9UMS4 (all domains)
Gene: PRPF19

Molecule: Pre-mRNA-processing factor 19

3D Structure

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Related Domains

Browse other domains in WD40, WD40_Prp19 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyWD40, WD40_Prp19(5.1.4.381)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Unknown atom or ionUNX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

PF24814WD40_Prp19

Prp19 WD40 domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4LG8 RCSB PDB: 4LG8 PDBe: 4LG8 UniProt: Q9UMS4

Downloads

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