ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mkvB2 - ECOD Domain | ECOD

ECOD/Domains/e4mkvB2

e4mkvB2

UID: 001107866

PDB

Range: B:151-469
PDB: 4MKV chain B(all domains)
UniProt: P04717 (all domains)
Gene: rbcL

Molecule: Ribulose bisphosphate carboxylase large chain

3D Structure

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Related Domains

Browse other domains in RuBisCO_large →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRuBisCO_large(2002.1.1.1)

Ligands

in contact, ≤ 4 Å

Abscisic AcidA8S
drugDrugBank DB16829
RIBULOSE-1,5-DIPHOSPHATERUB

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00016RuBisCO_large

Ribulose bisphosphate carboxylase large chain, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4MKV RCSB PDB: 4MKV PDBe: 4MKV UniProt: P04717

Downloads

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