ECODEvolutionary Classification of Protein Domains

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PDB 4MKV

X-RAY DIFFRACTION2.15 Å8 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ARibulose bisphosphate carboxylase large chainview chain

2 domains

e4mkvA1(A:12-150)e4mkvA2(A:151-469)

Chain BRibulose bisphosphate carboxylase large chainview chain

2 domains

e4mkvB1(B:12-150)e4mkvB2(B:151-469)

Chain CRibulose bisphosphate carboxylase large chainview chain

2 domains

e4mkvC1(C:12-150)e4mkvC2(C:151-469)

Chain DRibulose bisphosphate carboxylase large chainview chain

2 domains

e4mkvD1(D:12-150)e4mkvD2(D:151-469)

Chain SRibulose bisphosphate carboxylase small chain 3A, chloroplasticview chain

1 domain

e4mkvS1(S:1-123)

Chain TRibulose bisphosphate carboxylase small chain 3A, chloroplasticview chain

1 domain

e4mkvT1(T:1-123)

Chain URibulose bisphosphate carboxylase small chain 3A, chloroplasticview chain

1 domain

e4mkvU1(U:1-123)

Chain VRibulose bisphosphate carboxylase small chain 3A, chloroplasticview chain

1 domain

e4mkvV1(V:1-123)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4mkvA1	A:12-150	RuBisCO_large_N	304 → 304.10 → 304.10.1
2	A	e4mkvA2	A:151-469	RuBisCO_large	2002 → 2002.1 → 2002.1.1
3	B	e4mkvB1	B:12-150	RuBisCO_large_N	304 → 304.10 → 304.10.1
4	B	e4mkvB2	B:151-469	RuBisCO_large	2002 → 2002.1 → 2002.1.1
5	C	e4mkvC1	C:12-150	RuBisCO_large_N	304 → 304.10 → 304.10.1
6	C	e4mkvC2	C:151-469	RuBisCO_large	2002 → 2002.1 → 2002.1.1
7	D	e4mkvD1	D:12-150	RuBisCO_large_N	304 → 304.10 → 304.10.1
8	D	e4mkvD2	D:151-469	RuBisCO_large	2002 → 2002.1 → 2002.1.1
9	S	e4mkvS1	S:1-123	RuBisCO_small	302 → 302.2 → 302.2.1
10	T	e4mkvT1	T:1-123	RuBisCO_small	302 → 302.2 → 302.2.1
11	U	e4mkvU1	U:1-123	RuBisCO_small	302 → 302.2 → 302.2.1
12	V	e4mkvV1	V:1-123	RuBisCO_small	302 → 302.2 → 302.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors