ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4fmbE2 - ECOD Domain | ECOD

ECOD/Domains/e4fmbE2

e4fmbE2

UID: 001108929

PDB

Range: E:128-400
PDB: 4FMB chain E(all domains)
UniProt: Q7BU69 (all domains)
Gene: virA

Molecule: Cysteine protease-like virA

3D Structure

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Related Domains

Browse other domains in EspG →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLEE-encoded effector EspG C-terminal domain-related(3667)

HH-groupLEE-encoded effector EspG C-terminal domain-related(3667.1)

TT-groupLEE-encoded effector EspG C-terminal domain-related(3667.1.1)

FFamilyEspG(3667.1.1.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Aluminum fluorideAF3
Magnesium ionMG

Pfam Families

EspG protein

External Links

ECOD PDB View: 4FMB RCSB PDB: 4FMB PDBe: 4FMB UniProt: Q7BU69

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.