ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1w85A1 - ECOD Domain | ECOD

ECOD/Domains/e1w85A1

e1w85A1

UID: 000111091

PDB

Range: A:11-366
PDB: 1W85 chain A(all domains)
UniProt: P21873 (all domains)
Gene: pdhA

Molecule: PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT

3D Structure

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Related Domains

Browse other domains in E1_dh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyE1_dh(7574.1.1.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Thiamine diphosphateTPP
within 5 Å only

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHER

Pfam Families

Dehydrogenase E1 component

ClanCL0254THDP-binding

External Links

ECOD PDB View: 1W85 RCSB PDB: 1W85 PDBe: 1W85 UniProt: P21873

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.