ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nv4B1 - ECOD Domain | ECOD

ECOD/Domains/e4nv4B1

e4nv4B1

UID: 001126503

PDB

Range: B:62-173
PDB: 4NV4 chain B(all domains)
UniProt: Q81TW3 (all domains)

Molecule: Signal peptidase I

3D Structure

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Related Domains

Browse other domains in Peptidase_S26 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupLexA/Signal peptidase(4.11)

TT-groupLexA/Signal peptidase(4.11.1)

FFamilyPeptidase_S26(4.11.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Tetraethylene glycol)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG
Tetraethylene glycolPG4

Pfam Families

PF10502Peptidase_S26

Signal peptidase, peptidase S26

ClanCL0299Peptidase_SF

External Links

ECOD PDB View: 4NV4 RCSB PDB: 4NV4 PDBe: 4NV4 UniProt: Q81TW3

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.