ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4o2wD1 - ECOD Domain | ECOD

ECOD/Domains/e4o2wD1

e4o2wD1

UID: 001140511

PDB

Range: D:3997-4360
PDB: 4O2W chain D(all domains)
UniProt: Q15751 (all domains)
Gene: HERC1

Molecule: E3 ubiquitin-protein ligase HERC1

3D Structure

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Related Domains

Browse other domains in RCC1, RCC1_2, WD40_RLD →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRCC1, RCC1_2, WD40_RLD(5.1.4.255)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal
Unknown atom or ionUNX

Pfam Families

Regulator of chromosome condensation (RCC1) repeat

ClanCL0186Beta_propeller

Regulator of chromosome condensation (RCC1) repeat

ClanCL0186Beta_propeller

PF25390WD40_RLD

RCC1-like domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4O2W RCSB PDB: 4O2W PDBe: 4O2W UniProt: Q15751

Downloads

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