ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4lngA1 - ECOD Domain | ECOD

ECOD/Domains/e4lngA1

e4lngA1

UID: 001142900

PDB

Range: A:3-349
PDB: 4LNG chain A(all domains)
UniProt: Q4WP27 (all domains)
Gene: AFUA_4G07800

Molecule: CaaX farnesyltransferase alpha subunit Ram2

3D Structure

Loading viewer...

Related Domains

Browse other domains in PPTA →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

Farnesyl diphosphateFPP
drugDrugBank DB07780
TipifarnibJAN
drugDrugBank DB04960within 5 Å only

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 4LNG RCSB PDB: 4LNG PDBe: 4LNG UniProt: Q4WP27

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Potassium ionK

metalwithin 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.