ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gypD3 - ECOD Domain | ECOD

ECOD/Domains/e4gypD3

e4gypD3

UID: 001174533

PDB

Range: D:6-136
PDB: 4GYP chain D(all domains)
UniProt: Q46915 (all domains)
Gene: gudX

Molecule: Glucarate dehydratase-related protein

3D Structure

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Related Domains

Browse other domains in MR_MLE_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupEnolase-N/ribosomal protein(218)

HH-groupEnolase N-terminal domain-like(218.1)

TT-groupEnolase N-terminal domain-like(218.1.1)

FFamilyMR_MLE_N(218.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Citric acid, Glycerol, DI(HYDROXYETHYL)ETHER)

Citric acidCIT
DrugBank DB04272
GlycerolGOL
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer.

Pfam Families

PF02746MR_MLE_N

Mandelate racemase / muconate lactonizing enzyme, N-terminal domain

ClanCL0227Enolase_N

External Links

ECOD PDB View: 4GYP RCSB PDB: 4GYP PDBe: 4GYP UniProt: Q46915

Downloads

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Drug annotations from DrugDomain.