ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4iruC3 - ECOD Domain | ECOD

ECOD/Domains/e4iruC3

e4iruC3

UID: 001174751

PDB

Range: C:325-521
PDB: 4IRU chain C(all domains)
UniProt: Q5ZSM7 (all domains)
Gene: lepB

Molecule: LepB

3D Structure

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Related Domains

Browse other domains in LepB_GAP_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLepB GAP domain N-terminal subdomain(3634)

HH-groupLepB GAP domain N-terminal subdomain(3634.1)

TT-groupLepB GAP domain N-terminal subdomain(3634.1.1)

FFamilyLepB_GAP_N(3634.1.1.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Aluminum fluorideAF3
Magnesium ionMG

Pfam Families

PF18172LepB_GAP_N

LepB GAP domain N-terminal subdomain

External Links

ECOD PDB View: 4IRU RCSB PDB: 4IRU PDBe: 4IRU UniProt: Q5ZSM7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metalwithin 5 Å only

+ 2 additives (Glycerin, Acetate ion)

GlycerinGOL
DrugBank DB09462
Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.