ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3phdD2 - ECOD Domain | ECOD

ECOD/Domains/e3phdD2

e3phdD2

UID: 001218156

PDB

Range: D:4-87
PDB: 3PHD chain D(all domains)
UniProt: Q9UBN7 (all domains)
Gene: HDAC6

Molecule: Histone deacetylase 6

3D Structure

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Related Domains

Browse other domains in zf-UBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

ECOD PDB View: 3PHD RCSB PDB: 3PHD PDBe: 3PHD UniProt: Q9UBN7

Downloads

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