ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3q7aB2 - ECOD Domain | ECOD

ECOD/Domains/e3q7aB2

e3q7aB2

UID: 001226521

PDB

Range: B:2-241,B:263-349,B:371-519
PDB: 3Q7A chain B(all domains)
UniProt: Q55QV6 (all domains)

Molecule: Farnesyltransferase beta subunit

3D Structure

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Related Domains

Browse other domains in Prenyltrans →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyPrenyltrans(109.2.1.1)

Ligands

in contact, ≤ 4 Å

(2R)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid3FX
4-[(5-{[4-(3-CHLOROPHENYL)-3-OXOPIPERAZIN-1-YL]METHYL}-1H-IMIDAZOL-1-YL)METHYL]BENZONITRILE778
Farnesyl diphosphateFPP
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

PF00432Prenyltrans

Prenyltransferase alpha-alpha toroid domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 3Q7A RCSB PDB: 3Q7A PDBe: 3Q7A UniProt: Q55QV6

Downloads

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