ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1kv3F6 - ECOD Domain | ECOD

ECOD/Domains/e1kv3F6

e1kv3F6

UID: 001228526

PDB

Range: F:470-585
PDB: 1KV3 chain F(all domains)
UniProt: P21980 (all domains)
Gene: TGM2

Molecule: Protein-glutamine gamma-glutamyltransferase

3D Structure

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Related Domains

Browse other domains in Transglut_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyTransglut_C(11.1.1.17)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00927Transglut_C

Transglutaminase family, C-terminal ig like domain

ClanCL0159E-set

External Links

ECOD PDB View: 1KV3 RCSB PDB: 1KV3 PDBe: 1KV3 UniProt: P21980

Downloads

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