ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3iceE10 - ECOD Domain | ECOD

ECOD/Domains/e3iceE10

e3iceE10

UID: 001233432

PDB

Range: E:128-415
PDB: 3ICE chain E(all domains)
UniProt: P0AG30 (all domains)
Gene: rho

Molecule: Transcription termination factor rho

3D Structure

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Related Domains

Browse other domains in ATP-synt_ab →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyATP-synt_ab(2004.1.1.10)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
SpermidineSPD
drugDrugBank DB03566
Beryllium trifluoride ion

Pfam Families

PF00006ATP-synt_ab

ATP synthase alpha/beta family, nucleotide-binding domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3ICE RCSB PDB: 3ICE PDBe: 3ICE UniProt: P0AG30

Downloads

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Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.