SPD
SPERMIDINEnon-polymer
- Formula
- C7 H19 N3
- Weight
- 145.25 Da
- Type
- NON-POLYMER
- Release
- REL
327
PDB entries
919
ECOD domains in contact
1,048
Contacts (≤ 4 Å)
Top-binding ECOD families
| F-group | Family | Domains |
|---|---|---|
| 2490.3.1.1 | Ribosomal_L27A | 121 |
| 304.109.1.3 | Ribosomal_L15e | 71 |
| 7523.1.1.28 | SBP_bac_8 | 60 |
| 7559.1.1.1 | Ribosomal_L4 | 50 |
| 375.1.1.16 | Ribosomal_L37e | 47 |
| 1.1.7.2 | Ribosomal_L3 | 35 |
| 212.1.1.6 | Ribosomal_S9 | 29 |
| 5054.1.1.1 | Lig_chan | 28 |
| 218.2.1.1 | Ribosomal_L22 | 27 |
| 2490.3.1.2 | Ribosomal_L18 | 23 |
| 4.1.1.38 | Ribosomal_L2_C | 22 |
| 3699.1.1.1 | Spermine_synt_N | 22 |
| 2003.1.5.13 | Spermine_synth | 22 |
| 101.40.1.1 | Ribosomal_S13_N | 21 |
| 218.3.1.1 | Ribosomal_L17 | 19 |
| 2003.1.4.3 | DS | 18 |
| 375.1.1.6 | Ribosomal_L40e | 16 |
| 377.1.1.2 | Ribosomal_S14 | 16 |
| 2490.2.1.1 | Ribosomal_L13 | 13 |
| 4.1.1.14 | Ribosomal_L21e | 12 |
PDB entries containing SPD
| PDB | Chains | Instances |
|---|---|---|
| 11bq | a, A | 14 |
| 11dg | a | 14 |
| 1bo4 | A | 1 |
| 1i2x | D | 1 |
| 1pot | A | 1 |
| 1poy | 1, 2, 3, 4 | 4 |
| 1typ | A, B | 4 |
| 22it | A | 2 |
| 293d | A | 1 |
| 2elg | A | 1 |
| 2hmp | A | 1 |
| 2o07 | A, B | 2 |
| 2p18 | A | 1 |
| 2p1e | A | 1 |
| 2pwp | A, B, C | 3 |
| 2qby | C | 2 |
| 2ygp | A | 1 |
| 3a76 | A, B, C | 3 |
| 3bxz | A, B | 2 |
| 3c6k | A, B, C, D | 4 |
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