ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3bxzB4 - ECOD Domain | ECOD

ECOD/Domains/e3bxzB4

e3bxzB4

UID: 001233907

PDB

Range: B:416-596
PDB: 3BXZ chain B(all domains)
UniProt: P10408 (all domains)
Gene: secA

Molecule: Preprotein translocase subunit secA

3D Structure

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Related Domains

Browse other domains in P-loop_SecA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyP-loop_SecA(2004.1.1.224)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
SpermidineSPD
drugDrugBank DB03566
Magnesium ion

Pfam Families

PF21090P-loop_SecA

SecA P-loop domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3BXZ RCSB PDB: 3BXZ PDBe: 3BXZ UniProt: P10408

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.