ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3s9yA2 - ECOD Domain | ECOD

ECOD/Domains/e3s9yA2

e3s9yA2

UID: 001240610

PDB

Range: A:1-323
PDB: 3S9Y chain A(all domains)
UniProt: Q8IJH3 (all domains)
Gene: PF3D7_1023200

Molecule: Orotidine 5'-phosphate decarboxylase

3D Structure

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Related Domains

Browse other domains in OMPdecase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOMPdecase(2002.1.1.9)

Ligands

in contact, ≤ 4 Å

6-amino-5-fluorouridine 5'-(dihydrogen phosphate)FNU

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00215OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3S9Y RCSB PDB: 3S9Y PDBe: 3S9Y UniProt: Q8IJH3

Downloads

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