ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pkiE2 - ECOD Domain | ECOD

ECOD/Domains/e3pkiE2

e3pkiE2

UID: 001246990

PDB

Range: E:12-132,E:184-295
PDB: 3PKI chain E(all domains)
UniProt: Q8N6T7 (all domains)
Gene: SIRT6

Molecule: NAD-dependent deacetylase sirtuin-6

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilySIR2(2003.1.4.5)

Ligands

in contact, ≤ 4 Å

Adenosine-5-DiphosphoriboseAR6
drugDrugBank DB02059
Unknown atom or ionUNX
within 5 Å only

+ 1 additive (Sulfate ion)

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3PKI RCSB PDB: 3PKI PDBe: 3PKI UniProt: Q8N6T7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.