ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ikpC2 - ECOD Domain | ECOD

ECOD/Domains/e4ikpC2

e4ikpC2

UID: 001279354

PDB

Range: C:143-288
PDB: 4IKP chain C(all domains)
UniProt: Q86X55 (all domains)
Gene: CARM1

Molecule: Histone-arginine methyltransferase CARM1

3D Structure

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Related Domains

Browse other domains in PrmA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyPrmA(2003.1.5.55)

Ligands

in contact, ≤ 4 Å

(2S,5S)-2,6-diamino-5-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}hexanoic acid4IK
Unknown atom or ionUNX

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Ribosomal protein L11 methyltransferase (PrmA)

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4IKP RCSB PDB: 4IKP PDBe: 4IKP UniProt: Q86X55

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.