ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3synC3 - ECOD Domain | ECOD

ECOD/Domains/e3synC3

e3synC3

UID: 001280729

PDB

Range: C:165-366
PDB: 3SYN chain C(all domains)
UniProt: Q01960 (all domains)
Gene: flhF

Molecule: Flagellar biosynthesis protein flhF

3D Structure

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Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Aluminum fluorideAF3
Magnesium ionMG

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3SYN RCSB PDB: 3SYN PDBe: 3SYN UniProt: Q01960

Downloads

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metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.