ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4mdpA1 - ECOD Domain | ECOD

ECOD/Domains/e4mdpA1

e4mdpA1

UID: 001298418

PDB

Range: A:1-476
PDB: 4MDP chain A(all domains)
UniProt: O93784 (all domains)
Gene: bgl4

Molecule: Beta-glucosidase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glyco_hydro_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_1(2002.1.1.12)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379

+ 3 additives (Glycerin, Phosphate ion, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF00232Glyco_hydro_1

Glycosyl hydrolase family 1

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4MDP RCSB PDB: 4MDP PDBe: 4MDP UniProt: O93784

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4

DrugBank DB14523

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.