ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4upgA2 - ECOD Domain | ECOD

ECOD/Domains/e4upgA2

e4upgA2

UID: 001298722

PDB

Range: A:104-198
PDB: 4UPG chain A(all domains)
UniProt: P30626 (all domains)
Gene: SRI

Molecule: SORCIN

3D Structure

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Related Domains

Browse other domains in EF-hand_6,EF-hand_7 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyEF-hand_6,EF-hand_7(108.1.1.28)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (DI(HYDROXYETHYL)ETHER, Sulfate ion)

DI(HYDROXYETHYL)ETHERPEG
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13405EF-hand_6

EF-hand domain

ClanCL0220EF_hand

PF13499EF-hand_7

EF-hand domain pair

ClanCL0220EF_hand

External Links

ECOD PDB View: 4UPG RCSB PDB: 4UPG PDBe: 4UPG UniProt: P30626

Downloads

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