ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4o8nA1 - ECOD Domain | ECOD

ECOD/Domains/e4o8nA1

e4o8nA1

UID: 001299734

PDB

Range: A:27-328
PDB: 4O8N chain A(all domains)
UniProt: Q76BV4 (all domains)
Gene: stxIV

Molecule: Alpha-L-arabinofuranosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_62 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group5-bladed(5.1.2)

FFamilyGlyco_hydro_62(5.1.2.6)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Hexaethylene glycolP6G

+ 2 additives (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER)

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL

Pfam Families

PF03664Glyco_hydro_62

Glycosyl hydrolase family 62

ClanCL0143B_Fructosidase

External Links

ECOD PDB View: 4O8N RCSB PDB: 4O8N PDBe: 4O8N UniProt: Q76BV4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.