ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hhjA2 - ECOD Domain | ECOD

ECOD/Domains/e4hhjA2

e4hhjA2

UID: 001308053

PDB

Range: A:681-883
PDB: 4HHJ chain A(all domains)
UniProt: Q6DLV0 (all domains)

Molecule: Non-structural protein 5

3D Structure

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Related Domains

Browse other domains in Flavi_NS5_thumb →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyFlavi_NS5_thumb(4967.1.1.14)

Ligands

in contact, ≤ 4 Å

Hexaethylene glycolP6G
Zinc ionZN
metal

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF20483Flavi_NS5_thumb

Flavivirus RNA-directed RNA polymerase, thumb domain

ClanCL0027RdRP

External Links

ECOD PDB View: 4HHJ RCSB PDB: 4HHJ PDBe: 4HHJ UniProt: Q6DLV0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.