ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4l4hA2 - ECOD Domain | ECOD

ECOD/Domains/e4l4hA2

e4l4hA2

UID: 001308472

PDB

Range: A:409-543
PDB: 4L4H chain A(all domains)
UniProt: E9Q401 (all domains)
Gene: Ryr2

Molecule: Ryanodine receptor 2

3D Structure

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Related Domains

Browse other domains in RYDR_ITPR →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyRYDR_ITPR(109.4.1.20)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Triethylene glycol, DI(HYDROXYETHYL)ETHER)

Triethylene glycolPGE
DrugBank DB02327
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF01365RYDR_ITPR

RIH domain

ClanCL0020TPR

External Links

ECOD PDB View: 4L4H RCSB PDB: 4L4H PDBe: 4L4H UniProt: E9Q401

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.