ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nhrA1 - ECOD Domain | ECOD

ECOD/Domains/e4nhrA1

e4nhrA1

UID: 001314045

PDB

Range: A:33-169
PDB: 4NHR chain A(all domains)
UniProt: P0ADC1 (all domains)
Gene: lptE

Molecule: LPS-assembly lipoprotein LptE

3D Structure

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Related Domains

Browse other domains in LptE →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTolB, N-terminal domain(7503)

HH-groupTolB, N-terminal domain(7503.1)

TT-groupTolB, N-terminal domain(7503.1.1)

FFamilyLptE(7503.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Lipopolysaccharide-assembly

ClanCL0342TolB_N

External Links

ECOD PDB View: 4NHR RCSB PDB: 4NHR PDBe: 4NHR UniProt: P0ADC1

Downloads

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