ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mesB1 - ECOD Domain | ECOD

ECOD/Domains/e4mesB1

e4mesB1

UID: 001346420

PDB

Range: B:6-182
PDB: 4MES chain B(all domains)
UniProt: D8KFM5 (all domains)

Molecule: Thiamine transporter ThiT

3D Structure

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Related Domains

Browse other domains in Thia_YuaJ →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSpectrin repeat-like(604)

HH-groupMIT domain(604.12)

TT-groupMIT domain(604.12.1)

FFamilyThia_YuaJ(604.12.1.3)

Ligands

in contact, ≤ 4 Å

B-nonylglucosideBNG
drugDrugBank DB02451
2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]phenyl}ethanol26G
Hexaethylene glycolP6G

Pfam Families

PF09515Thia_YuaJ

Thiamine transporter protein (Thia_YuaJ)

ClanCL0315Gx_transp

External Links

ECOD PDB View: 4MES RCSB PDB: 4MES PDBe: 4MES UniProt: D8KFM5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-(2-METHOXYETHOXY)ETHANOLPG0

+ 3 additives (Pentaethylene glycol, DI(HYDROXYETHYL)ETHER, Tetraethylene glycol)

Pentaethylene glycol1PE
DI(HYDROXYETHYL)ETHERPEG
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.