ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pz3A1 - ECOD Domain | ECOD

ECOD/Domains/e4pz3A1

e4pz3A1

UID: 001349655

PDB

Range: A:20-169
PDB: 4PZ3 chain A(all domains)
UniProt: P16070 (all domains)
Gene: CD44

Molecule: CD44 antigen

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyXlink(209.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (2-(N-morpholino)ethanesulfonic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814within 5 Å only
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHER

Pfam Families

Extracellular link domain

ClanCL0056C_Lectin

External Links

ECOD PDB View: 4PZ3 RCSB PDB: 4PZ3 PDBe: 4PZ3 UniProt: P16070

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.