ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r8pN2 - ECOD Domain | ECOD

ECOD/Domains/e4r8pN2

e4r8pN2

UID: 001406200

PDB

Range: N:16-116
PDB: 4R8P chain N(all domains)
UniProt: P61077 (all domains)
Gene: UBE2D3

Molecule: E3 ubiquitin-protein ligase RING2, Ubiquitin-conjugating enzyme E2 D3

3D Structure

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Related Domains

Browse other domains in zf-C3HC4_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4_2(376.1.1.23)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13923zf-C3HC4_2

Zinc finger, C3HC4 type (RING finger)

ClanCL0229RING

External Links

ECOD PDB View: 4R8P RCSB PDB: 4R8P PDBe: 4R8P UniProt: P61077

Downloads

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