ECOD
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PDB 4R8P

X-RAY DIFFRACTION3.28 Å14 chains14 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHistone H3.2view chain
1 domain
e4r8pA1(A:37-134)
Chain BHistone H4view chain
1 domain
e4r8pB1(B:17-102)
Chain CHistone H2Aview chain
1 domain
e4r8pC1(C:16-119)
Chain DHistone H2B 1.1view chain
1 domain
e4r8pD1(D:31-125)
Chain EHistone H3.2view chain
1 domain
e4r8pE1(E:38-134)
Chain FHistone H4view chain
1 domain
e4r8pF1(F:21-102)
Chain GHistone H2Aview chain
1 domain
e4r8pG1(G:12-118)
Chain HHistone H2B 1.1view chain
1 domain
e4r8pH1(H:31-125)
Chain KPolycomb complex protein BMI-1view chain
1 domain
e4r8pK1(K:3-107)
Chain LE3 ubiquitin-protein ligase RING2, Ubiquitin-conjugating enzyme E2 D3view chain
2 domains
e4r8pL1(L:202-347)e4r8pL2(L:15-116)
Chain MPolycomb complex protein BMI-1view chain
1 domain
e4r8pM1(M:6-102)
Chain NE3 ubiquitin-protein ligase RING2, Ubiquitin-conjugating enzyme E2 D3view chain
2 domains
e4r8pN1(N:202-347)e4r8pN2(N:16-116)

All Domains (14)

#ChainDomain IDRangeFamilyClassification
1Ae4r8pA1A:37-134Histone148 → 148.1 → 148.1.1
2Be4r8pB1B:17-102CENP-T_C148 → 148.1 → 148.1.1
3Ce4r8pC1C:16-119Histone,Histone_H2A_C148 → 148.1 → 148.1.1
4De4r8pD1D:31-125Histone148 → 148.1 → 148.1.1
5Ee4r8pE1E:38-134Histone148 → 148.1 → 148.1.1
6Fe4r8pF1F:21-102CENP-T_C148 → 148.1 → 148.1.1
7Ge4r8pG1G:12-118Histone,Histone_H2A_C148 → 148.1 → 148.1.1
8He4r8pH1H:31-125Histone148 → 148.1 → 148.1.1
9Ke4r8pK1K:3-107zf-C3HC4_2376 → 376.1 → 376.1.1
10Le4r8pL1L:202-347UQ_con216 → 216.1 → 216.1.1
11Le4r8pL2L:15-116zf-C3HC4_2376 → 376.1 → 376.1.1
12Me4r8pM1M:6-102zf-C3HC4_2376 → 376.1 → 376.1.1
13Ne4r8pN1N:202-347UQ_con216 → 216.1 → 216.1.1
14Ne4r8pN2N:16-116zf-C3HC4_2376 → 376.1 → 376.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors