ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wnrA1 - ECOD Domain | ECOD

ECOD/Domains/e4wnrA1

e4wnrA1

UID: 001406483

PDB

Range: A:307-487
PDB: 4WNR chain A(all domains)
UniProt: Q46A62 (all domains)
Gene: Mbar_A2306

Molecule: Leucine-rich-repeat protein

3D Structure

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Related Domains

Browse other domains in Roc →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRoc(2004.1.1.164)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Magnesium ionMG
metal

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

Ras of Complex, Roc, domain of DAPkinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4WNR RCSB PDB: 4WNR PDBe: 4WNR UniProt: Q46A62

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.