ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3p3vA1 - ECOD Domain | ECOD

ECOD/Domains/e3p3vA1

e3p3vA1

UID: 000141163

PDB

Range: A:1-162
PDB: 3P3V chain A(all domains)
UniProt: Q9A0T4 (all domains)
Gene: agaV

Molecule: PTS system, N-acetylgalactosamine-specific IIB component

3D Structure

Loading viewer...

Related Domains

Browse other domains in PTSIIB_sorb →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPTS IIb component(7537)

HH-groupPTS IIb component(7537.1)

TT-groupPTS IIb component(7537.1.1)

FFamilyPTSIIB_sorb(7537.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03830PTSIIB_sorb

PTS system sorbose subfamily IIB component

External Links

ECOD PDB View: 3P3V RCSB PDB: 3P3V PDBe: 3P3V UniProt: Q9A0T4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure