ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3peiA2 - ECOD Domain | ECOD

ECOD/Domains/e3peiA2

e3peiA2

UID: 000141518

PDB

Range: A:1-166
PDB: 3PEI chain A(all domains)
UniProt: Q5NFC1 (all domains)
Gene: pepA

Molecule: Cytosol aminopeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_M17_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMacro domain-like(7529)

HH-groupMacro domain-like(7529.1)

TT-groupMacro domain-like(7529.1.1)

FFamilyPeptidase_M17_N(7529.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (1,2-ETHANEDIOL, Formic acid, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
Formic acidFMT
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02789Peptidase_M17_N

Cytosol aminopeptidase family, N-terminal domain

ClanCL0223MACRO

External Links

ECOD PDB View: 3PEI RCSB PDB: 3PEI PDBe: 3PEI UniProt: Q5NFC1

Downloads

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